CX299958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = -3 Query: 383 YYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 529 YYGRGPIQLTG NY AG A+G D + +P+ V+ D V+SFKTA+W+WM Sbjct: 128 YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWM 176
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+W+WM Sbjct: 185 GRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWM 236
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D +ISFK+A+W+WM Sbjct: 173 GRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWM 224
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK Y+GRGPIQ++ N NY AG+A+GFDGL +PE VA I+F+TALW+WM Sbjct: 156 GKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWM 207
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.997e-12 Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 G YYGRGPIQLTG NY AG+AI D +N+P+ VA D +SFKTA+W+WM Sbjct: 117 GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWM 168
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.608e-12 Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK Y+GRGP+QLT N NY GRAIG D LN+P+ +A D ISFK+A W+WM Sbjct: 178 GKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWM 229
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 383 YYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 529 YYGRGPIQLT NY AG AIG + +N+P+ VA D ISFKTA+W+WM Sbjct: 119 YYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWM 167
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK YYGRGP+QL+ N NY G A+ + L +P+ VA DRV+SFKTALW+WM Sbjct: 108 GKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWM 159
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK YYGRGPIQ++ N NY AG+AIG + L++P+ VA D +SFKTA W+WM Sbjct: 187 GKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWM 238
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.294e-11 Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = -3 Query: 383 YYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 529 YYGRGPIQLT NY AG AI D +N+P+ VA D ISFKTA+W+WM Sbjct: 119 YYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWM 167 The following BLAST results are available for this feature:
BLAST of CX299958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299958 ID=CX299958; Name=CX299958; organism=Citrus clementina; type=EST; length=540bpback to top |