CX299958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.294e-11 Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK YYGRGPIQL+ N NY AG+AIG D L P+ VA D +SF TA W+WM Sbjct: 190 GKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWM 241
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.690e-11 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK Y+GRGP+QL+ N NY GRAIG D LN+P+ ++ D ISFK+A W+WM Sbjct: 159 GKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWM 210
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.690e-11 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK Y+GRGP+QL+ N NY GRAIG D LN+P+ ++ D ISFK+A W+WM Sbjct: 181 GKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWM 232
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.207e-11 Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 G+ YYGRGPIQ++ N NY GRAIG + LN+P+ VA + V+SFK+A+W+WM Sbjct: 191 GQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWM 242
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.423e-11 Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK YYGRGPIQLT N NY AG+AI D +N+P+ ++ + +SFKTA+W+WM Sbjct: 185 GKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWM 236
BLAST of CX299958 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 6.423e-11 Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = -3 Query: 383 GKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM 538 GK Y RGPIQLT N NY AG+AIG D + +P+ V +D +ISFKTALW+WM Sbjct: 233 GKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWM 284 The following BLAST results are available for this feature:
BLAST of CX299958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299958 ID=CX299958; Name=CX299958; organism=Citrus clementina; type=EST; length=540bpback to top |