CX299965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_MYCBT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 336 DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF M+ V+L FT+ AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYIRLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_MYCBP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 336 DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF M+ V+L FT+ AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYIRLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_MYCBO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium bovis GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 336 DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF M+ V+L FT+ AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYIRLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_GEOUR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacter uraniireducens (strain Rf4) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 56/95 (58.95%), Postives = 74/95 (77.89%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 336 DL+ +G IPEFVGR P+L SLT L E+ +V++L EPKNAL KQY++LF M +VKL FT+ +L IAK+A + TGARGLR+ILE+ + + MYEIP Sbjct: 291 DLLKFGFIPEFVGRLPVLASLTELDEEAMVQILKEPKNALVKQYQKLFEMEHVKLKFTDGSLVAIAKEALKRRTGARGLRSILENAMLDIMYEIP 385
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_ERWCT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Erwinia carotovora subsp. atroseptica GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 53/99 (53.54%), Postives = 77/99 (77.78%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 348 DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL KQY+ LF++ V+L F ++AL IAKKA + TGARGLR+I+E+ L E MY++P +++ Sbjct: 294 DLIKFGLIPEFIGRLPVVATLRELSEDALIQILREPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMVRKTGARGLRSIVEAALLETMYDLPSLES 392
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_COXBU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Coxiella burnetii GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 342 DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNAL KQY++LF V++ F E AL+ IAK+A + TGARGLR+I+E L + MY++P V Sbjct: 290 DLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEFEGVEIDFREDALKAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPGV 386
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_COXBN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Coxiella burnetii (strain Dugway 5J108-111) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 342 DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNAL KQY++LF V++ F E AL+ IAK+A + TGARGLR+I+E L + MY++P V Sbjct: 290 DLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEFEGVEIDFREDALKAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPGV 386
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_COXB2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Coxiella burnetii (strain CbuG_Q212) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 342 DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNAL KQY++LF V++ F E AL+ IAK+A + TGARGLR+I+E L + MY++P V Sbjct: 290 DLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEFEGVEIDFREDALKAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPGV 386
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_COXB1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Coxiella burnetii (strain CbuK_Q154) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 342 DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNAL KQY++LF V++ F E AL+ IAK+A + TGARGLR+I+E L + MY++P V Sbjct: 290 DLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEFEGVEIDFREDALKAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPGV 386
BLAST of CX299965 vs. ExPASy Swiss-Prot
Match: CLPX_BART1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 57/95 (60.00%), Postives = 74/95 (77.89%), Query Frame = 1 Query: 52 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 336 DLI +GLIPEF+GR PI+ +L L + L+++L++PKNAL KQY+RLF M NV+L F E ALR IAKKA + TGARGLR+I+E IL E M+E+P Sbjct: 293 DLIKFGLIPEFIGRLPIVATLEDLDVNALMQILSQPKNALVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLRSIMEKILLETMFELP 387 The following BLAST results are available for this feature:
BLAST of CX299965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299965 ID=CX299965; Name=CX299965; organism=Citrus clementina; type=EST; length=679bpback to top |