CX299975

Overview
NameCX299975
Unique NameCX299975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length451
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:1022..1471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.302e-19
Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSE +A+++LNA+N+     PW ++FSY RALQ + LK WGG+ EN+KAAQD L+ RAK N  A  G+Y   G    A + +FV  + Y
Sbjct:  270 FLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.543e-18
Identity = 49/95 (51.58%), Postives = 59/95 (62.11%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 278
            FLSGG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  WGG+ EN K  Q+  + RA ANS A  G+Y   G S  A  + +F   YTY
Sbjct:  270 FLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 2.015e-18
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQG--PNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSE EA+LNLNA+N+   P PW ++FSY RALQ + L  W G+ +N  AA +  + RA+ N LA  GKY G G+   A + ++V  + Y
Sbjct:  270 FLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.015e-18
Identity = 47/94 (50.00%), Postives = 59/94 (62.77%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W G  EN KAA +  L RA+AN LA  GKY   G    A + ++V  + Y
Sbjct:  270 FLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 3.436e-18
Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGG SEV A+  LNAMN  P   PW ++FSYARALQ++ +K WGG+   V+A +   + RAK NSLAQLGKY    + ++  + ++V G TY
Sbjct:  280 FLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY-NRADDDKDSQSLYVAGNTY 372          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 3.436e-18
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 278
            FLSGG SE +ATLNLNA+N+ P   PW +SFSY RALQ + L  WGG+  N KA Q+  + RA AN  A  G+Y   G S   A + +F   YTY
Sbjct:  270 FLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 5.862e-18
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 278
            FLSGGQSE +A+LNLNA+NQ P   PW +SFSY RALQ + LK W G P N+ AA+     RA  N LA  GKY   G S   A + +F+  + Y
Sbjct:  270 FLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 89.7373 bits (221), Expect = 5.862e-18
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSE EA+LNLNA+N+ P   PW ++FSY RALQ + L  W G+ +N  AA +  + RA+ N LA  G+Y G G+   A + +++  + Y
Sbjct:  270 FLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 5.862e-18
Identity = 48/95 (50.53%), Postives = 58/95 (61.05%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 278
            FLSGG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  WGG+ EN KA Q+  + RA  N  A  G+Y   G S  A  + +F   YTY
Sbjct:  270 FLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CX299975 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.655e-18
Identity = 48/94 (51.06%), Postives = 61/94 (64.89%), Query Frame = 3
Query:    3 FLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 278
            FLSGGQSE EAT NLNAMN+     PW +SFS+ RALQ + LK W G+ EN++ A+   L R KANS A LG Y G+  ++   + + VK Y Y
Sbjct:  264 FLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDAAAD--TESLHVKDYKY 355          
The following BLAST results are available for this feature:
BLAST of CX299975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALF1_LAMJA5.302e-1950.00Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOB_BOVIN1.543e-1851.58Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALDOC_RAT2.015e-1847.87Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOC_CARAU2.015e-1850.00Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALF_TRYBB3.436e-1850.00Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALDOB_MOUSE3.436e-1850.53Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALF2_LAMJA5.862e-1850.53Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOC_MOUSE5.862e-1845.74Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_RABIT5.862e-1850.53Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALF_MAIZE7.655e-1851.06Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC07004F05SK SaltLeaf1 Citrus clementina cDNA clone C07004F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299975 ID=CX299975; Name=CX299975; organism=Citrus clementina; type=EST; length=451bp
TGTTCTTGTCTGGTGGGCAATCTGAGGTTGAGGCAACCCTCAACTTGAAC
GCCATGAACCAAGGTCCCAACCCATGGCACGTATCTTTCTCTTATGCCAG
AGCTCTCCAAAACACCTGCCTGAAGACATGGGGTGGCAGGCCAGAGAATG
TCAAGGCAGCTCAGGATACTCTGCTCACCCGTGCCAAGGCCAACTCACTT
GCTCAGCTCGGCAAGTACACTGGCGAGGGAGAATCAGAGGAGGCCAAGAA
AGGAATGTTCGTCAAGGGATACACCTACTAAATTTGTTAGCACGAAGATC
ATAAGAATGGTGAAGAAATTTGAAATGAGTAGTCATCTCAAATGTGTTAA
TGCTTTATAGCCGTGCTTTGGAGACTATTTTTGTTCATGATTACATGTAC
TTTTAGCAACTTAATAAACTTCTTGCCAATGAAAAAAAAAAAAAAAAAAA
A
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