CX299980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.001e-31 Identity = 64/66 (96.97%), Postives = 66/66 (100.00%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 A+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 200 AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.001e-31 Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 ADDPEAFA++KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 200 ADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.001e-31 Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 ADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK Sbjct: 203 ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.001e-31 Identity = 64/66 (96.97%), Postives = 66/66 (100.00%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 ADDPEAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 201 ADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.307e-31 Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 A+DPEAFAELKVKEIKNGRLAMFSMFGFFVQA+VTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 201 AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.307e-31 Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 ADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK Sbjct: 198 ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.307e-31 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 195 ADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPG Sbjct: 197 ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.708e-31 Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 A+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK Sbjct: 202 AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.708e-31 Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 A+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK Sbjct: 202 AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of CX299980 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.708e-31 Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 1 Query: 1 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 198 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK Sbjct: 202 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267 The following BLAST results are available for this feature:
BLAST of CX299980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299980 ID=CX299980; Name=CX299980; organism=Citrus clementina; type=EST; length=338bpback to top |