CX299986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STRCO (Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=1 SV=4) HSP 1 Score: 105.145 bits (261), Expect = 2.519e-22 Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTD +++ VL + PVLV+FWA WCGPCR I P ++ ++ +Y K++ K+N DE+P A +YG+ SIPT+ +++ GE T++GA PK+ + +E F+ Sbjct: 8 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 108
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_THIFE (Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.611e-22 Identity = 45/101 (44.55%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 V+D ++++ VL S PVLV+FWA WCGPC+MI PI++E++ +Y +L+ K N DE+P+ +Y IR IPT+++FK G+ + T +GA+ K+ LT ++ L Sbjct: 8 VSDDSFETDVLKSSKPVLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFNIDENPNTPPQYAIRGIPTLLLFKAGKLEATKVGALSKAQLTAFLDSQL 108
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_CHLAA (Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trxA PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.250e-21 Identity = 46/101 (45.54%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 V D+ + VL S +PV+V+FWAPWCGPCR+I PI+D+L+ +Y G+L KVNTD++ A++ GI+ IPT++IFK+G + ++GA P++ +K L Sbjct: 7 VHDSDFAEKVLKSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDNVQYASQLGIQGIPTLVIFKDGREVGRLVGARPEAMYREIFDKVL 107
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO2_SHIFL (Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.637e-21 Identity = 46/103 (44.66%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 23 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFKNG+ D + GAVPK+ + + + L Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL 139
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO2_ECOLI (Thioredoxin-2 OS=Escherichia coli (strain K12) GN=trxC PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.637e-21 Identity = 46/103 (44.66%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 23 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFKNG+ D + GAVPK+ + + + L Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL 139
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO2_ECOL6 (Thioredoxin-2 OS=Escherichia coli O6 GN=trxC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.637e-21 Identity = 46/103 (44.66%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 23 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFKNG+ D + GAVPK+ + + + L Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL 139
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO2_ECO57 (Thioredoxin-2 OS=Escherichia coli O157:H7 GN=trxC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.637e-21 Identity = 46/103 (44.66%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 23 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFKNG+ D + GAVPK+ + + + L Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL 139
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAAW (Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAAU (Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAAS (Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104 The following BLAST results are available for this feature:
BLAST of CX299986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299986 ID=CX299986; Name=CX299986; organism=Citrus clementina; type=EST; length=580bpback to top |