CX299986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAAR (Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAAN (Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAAM (Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAAC (Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAAB (Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAA8 (Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAA3 (Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO2_CORNE (Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 44/98 (44.90%), Postives = 66/98 (67.35%), Query Frame = 2 Query: 26 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 319 TD +Q+ VLD+ +PVLV+FWA WC PC+ I P+++ELS +Y GK+K KV+ A +Y IR+IP +++FK+GE +GA P+S L I++ Sbjct: 9 TDENFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTAVKYNIRNIPALLMFKDGEVVAQQVGAAPRSKLAAFIDQ 106
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAES (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.382e-20 Identity = 47/101 (46.53%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTD+ + S + +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+GE D V+G PK L ++K L Sbjct: 6 VTDSDFDSKI-ESGVK-LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of CX299986 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.382e-20 Identity = 47/101 (46.53%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 23 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 325 VTD+ + S + +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+GE D V+G PK L ++K L Sbjct: 6 VTDSDFDSKI-ESGVK-LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104 The following BLAST results are available for this feature:
BLAST of CX299986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299986 ID=CX299986; Name=CX299986; organism=Citrus clementina; type=EST; length=580bpback to top |