CX300035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: LCYE_ARATH (Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 3.187e-17 Identity = 42/103 (40.78%), Postives = 66/103 (64.08%), Query Frame = 2 Query: 68 QVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 Q AYG+ EVE P+D D+MVFMD+RD N +++ ++ PTFLYAMP + +R+F EET L ++ +P ++ +++ RL LGI++ E+E IP+ Sbjct: 264 QTAYGVEVEVENSPYDPDQMVFMDYRDY---TNEKVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRLDTLGIRILKTYEEEWSYIPV 363
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: Y801_DEIRA (Uncharacterized carotenoid cyclase DR_0801 OS=Deinococcus radiodurans GN=DR_0801 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.810e-12 Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 V+DA+G + P Q AYG++A P MV+MD+R ELK + TFLYAM +R F+EETSL+ARP +++ R++ARL G + E +E PM Sbjct: 136 VVDASGHGALVSPVRFPGGAALQTAYGVVARFRRPPVTPGSMVWMDYRTPA----PELKRGEA---TFLYAMHLGGDRYFVEETSLIARPAPTRAELRRRLLARLSAQGTPPHATESEEWVAFPM 253 The following BLAST results are available for this feature:
BLAST of CX300035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300035 ID=CX300035; Name=CX300035; organism=Citrus clementina; type=EST; length=377bpback to top |