CX300037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5) HSP 1 Score: 104.375 bits (259), Expect = 3.893e-22 Identity = 58/136 (42.65%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 410 RARAAA +I+PT+T NG+A+RVPTPN K+ EEVNAA + +A+ ELKGIL+ +EPLVS D+ + MVKV++WYDNE GYS RVVDLA +A+ Sbjct: 197 RARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 332
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.252e-20 Identity = 56/137 (40.88%), Postives = 70/137 (51.09%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 413 RARAAALNIVPTST +G ALRVP P S + +E+NAAF+ +A+ LKGIL D P+VS D + DD KV++WYDNEWGYS R+VDL +V + Sbjct: 203 RARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DDQAKVVSWYDNEWGYSNRLVDLVTLVGKS 338
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.252e-20 Identity = 56/137 (40.88%), Postives = 70/137 (51.09%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 413 RARAAALNIVPTST +G ALRVP P S + +E+NAAF+ +A+ LKGIL D P+VS D + DD KV++WYDNEWGYS R+VDL +V + Sbjct: 203 RARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DDQAKVVSWYDNEWGYSNRLVDLVTLVGKS 338
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20 Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 404 RARAAA+NI+PT+T +G+A+RVPTP+ K+T EEVNA +E+ + LKGI+ DEP+VS D +G +VKV +WYDNE+GYS RVVD +++ Sbjct: 197 RARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELL 330
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20 Identity = 56/139 (40.29%), Postives = 67/139 (48.20%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 419 RARA +I+PT+T +G+ALRVP PN AEEVN AF+ +A + G+L DEPLVS D+ M D VKV+AWYDNEWGYS RVVDL VA K Sbjct: 197 RARACGESIIPTTTGAAKALSLVLPHLKGKLHGLALRVPVPNVSLVDLVVDLKTDVTAEEVNEAFKRAAKTSMYGVLDYSDEPLVSTDYNTNPHSAVIDGLTTMVMEDRKVKVLAWYDNEWGYSCRVVDLIRHVAARMK 335
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_MYCAV (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium avium GN=gapA PE=3 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20 Identity = 55/137 (40.15%), Postives = 69/137 (50.36%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 413 RARAAALNIVPTST +G ALRVP P K E++NAAF+ +A+ LKGIL D P+VS D + D+ KV++WYDNEWGYS R+VDL +V + Sbjct: 203 RARAAALNIVPTSTGAAKAIGLVMPNLKGKLDGYALRVPIPTGSVTDLTAELKKPASVEDINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DNQAKVVSWYDNEWGYSNRLVDLVALVGKS 338
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_MYCLE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium leprae GN=gapA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.872e-19 Identity = 53/137 (38.69%), Postives = 67/137 (48.91%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 413 RARAAALN+VPTST +G ALRVP P SK E+NA F+++A+ LKGIL D P+VS D + KV++WYDNEWGYS R+VDL +V + Sbjct: 203 RARAAALNVVPTSTGAAKAIGLVMPELKGKLDGYALRVPIPTGSVTDLTADLSKCVSVNEINAVFQDAAEGRLKGILKYVDAPIVSSDIVTDPHSSIFDSGLTKVIA-SQAKVVSWYDNEWGYSNRLVDLVGLVGKS 338
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P2_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MW2) GN=gapA2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.975e-19 Identity = 55/132 (41.67%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 398 RAR+ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 198 RARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P2_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MSSA476) GN=gapA2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.975e-19 Identity = 55/132 (41.67%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 398 RAR+ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 198 RARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.975e-19 Identity = 55/132 (41.67%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLAD 398 RAR+ +I+PTST +G+ALRVPT N K+ AEEVN AF + L+GI+ V +PLVSVDF M + VKVIAWYDNEWGYS RVVD+A+ Sbjct: 198 RARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPHSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAE 326 The following BLAST results are available for this feature:
BLAST of CX300037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 270
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300037 ID=CX300037; Name=CX300037; organism=Citrus clementina; type=EST; length=555bpback to top |