CX300037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_SHEAM (D-erythrose-4-phosphate dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=epd PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 41/131 (31.30%), Postives = 56/131 (42.75%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 395 R RAA+ +I+P T I++RVPT N + VNAA + +AD GIL DEPLVS DF +VK++ W DNEWG++ R++D A Sbjct: 199 RTRAASQSIIPVDTKLARGIERILPQMKDKFEAISVRVPTINVTAIDLSVTLDTRVDIATVNAALKAAADGSASGILGYTDEPLVSCDFNHDPRSSVVDGTQTRVSAGHLVKMLLWCDNEWGFANRMLDTA 329
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 39/128 (30.47%), Postives = 56/128 (43.75%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 RA NI+P+ST G++ RVPT + K E++ +E+++ KGI+ +E +VS DF + + VK+I WYDNEWGYS RV DL Sbjct: 198 RAVVNNIIPSSTGAAKAVGKVIPSLNGKLTGLSFRVPTIDVSVIDLVVRLEKPASYEDIKKTVKEASEGAYKGIIEYTEEQVVSADFIGHHASSIFDAQAGIQLNPNFVKLIVWYDNEWGYSARVCDL 325
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_HELPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori GN=gapA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 42/134 (31.34%), Postives = 65/134 (48.51%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 404 R+RAAA NI+PT+T +G ++RVP+ + KK + +N E++ LKG+L + + VS DF + ++MVK++ WYDNEWGYS R+VD+A + Sbjct: 197 RSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKAPKDPINDLLIEASKGVLKGVLEIDLKERVSSDFISNPHSVIIAPDLTFTL-ENMVKIMGWYDNEWGYSNRLVDMAQFM 329
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_SHEFN (D-erythrose-4-phosphate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=epd PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 38/129 (29.46%), Postives = 56/129 (43.41%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA +I+P T I++RVPT N KK E++N+ + +++ GIL DEPLVS DF +VK++ W DNEWG++ R++D Sbjct: 199 RTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLEKKVNIEQINSVLQRASNGSFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGHLVKLLLWCDNEWGFANRMLD 327
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_HELPJ (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori J99 GN=gapA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.230e-12 Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 404 R+RAAA NI+PT+T +G ++RVP+ + KK + +N ++ LKG+L + + VS DF + ++MVK++ WYDNEWGYS R+VD+A + Sbjct: 197 RSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKALKDPINDLLITASKGTLKGVLEIDLKERVSSDFISNPNSVIIAPDLTFTL-ENMVKIMGWYDNEWGYSNRLVDMAQFM 329
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.137e-12 Identity = 40/128 (31.25%), Postives = 58/128 (45.31%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 R A NI+P ST G+A RVPTP+ ++ + A + +A + GIL+ ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL Sbjct: 273 RGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAIKAAAKGPMAGILAYTEDEVVSTDFVGDSHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDL 400
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 8.137e-12 Identity = 40/128 (31.25%), Postives = 58/128 (45.31%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 R A NI+P ST G+A RVPTP+ ++ + A + +A + GIL+ ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL Sbjct: 272 RGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDL 399
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.063e-11 Identity = 40/118 (33.90%), Postives = 52/118 (44.07%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNE 362 R AA NI+P +T G+A RVPTPN K +E+ A +E+A+ LKGIL DE +VS DF + D VK+I+WYDNE Sbjct: 187 RGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNE 304
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_SALTY (D-erythrose-4-phosphate dehydrogenase OS=Salmonella typhimurium GN=epd PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-11 Identity = 38/129 (29.46%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVS+DF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_SALTI (D-erythrose-4-phosphate dehydrogenase OS=Salmonella typhi GN=epd PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-11 Identity = 38/129 (29.46%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVS+DF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328 The following BLAST results are available for this feature:
BLAST of CX300037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 270
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300037 ID=CX300037; Name=CX300037; organism=Citrus clementina; type=EST; length=555bpback to top |