CX300039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_PYRAB (30S ribosomal protein S7P OS=Pyrococcus abyssi GN=rps7p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.643e-19 Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +R + AE LA+E+I AA SYA KK EIER+A+++R Sbjct: 105 KEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 215
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METB6 (30S ribosomal protein S7P OS=Methanoregula boonei (strain 6A8) GN=rps7p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.148e-18 Identity = 46/111 (41.44%), Postives = 75/111 (67.57%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 + A E+I+ T +NPI+V+V+A+ N+GPRE+ R+ G+ ++VD +PLRRV+ AI + +S+ ++ K + LADELI A+KG + Y++ KK+E ER+AK+ R Sbjct: 94 RDAFELINKKTKRNPIEVLVEAIGNTGPREETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADELIAASKGDAKCYSVGKKEEKERIAKSAR 204
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_HALWD (30S ribosomal protein S7P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps7p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.664e-18 Identity = 44/109 (40.37%), Postives = 71/109 (65.14%), Query Frame = 2 Query: 8 AMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 A + IH T++NP+QV+V V N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G + ++++ ++ A+ LA +I AA SYA+ +K+E ERVA+A R Sbjct: 119 AFDTIHNRTEENPVQVLVRGVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIADGTQRGSYKSAQSAADSLAQVIIGAANYDVQSYAVGQKEESERVAEAAR 227
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_NATPD (30S ribosomal protein S7P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps7p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.818e-17 Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 + A +I+ TD+NP+QV+V AV N+GPRE+ R+ G+ +AVD++P RRV+ A+ + G +F+ + E LA +LI AA +Y + +K+E ERVA A R Sbjct: 93 REAFDIVAERTDENPVQVLVTAVENAGPREETVRLKYGGISVPKAVDVAPQRRVDLALKFIAEGTYNDSFKTTTPVEEALAHQLIGAANYDLQAYPVSQKEEQERVAAAAR 203
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_HALMO (30S ribosomal protein S7P OS=Halococcus morrhuae GN=rps7p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.051e-17 Identity = 43/111 (38.74%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 ++A ++I T+++P+QV+V AV N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G ++F++ E LA++L AA +YA+ +K+E ERVA A R Sbjct: 93 RNAFDLIAERTEESPVQVLVSAVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIAEGTHSASFKSPTDAHEALAEQLTGAANYDVQTYAVNQKEEKERVAAAAR 203
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_NANEQ (30S ribosomal protein S7P OS=Nanoarchaeum equitans GN=rps7p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.626e-16 Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 2 Query: 14 EIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 EII T QNP++V V A+ N+ PRE+ T I G +AVD SP RRV+ AI + GA + + +I E LA+E+INA S SYAIK+K EIE+ A++ R Sbjct: 92 EIIEKRTKQNPLKVFVKAIENAAPREETTTIEYGGARYPKAVDCSPQRRVDLAIRHMVWGAFHGSRKKPISIEEALAEEIINAYNNSLKSYAIKRKLEIEKTAESAR 198 The following BLAST results are available for this feature:
BLAST of CX300039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300039 ID=CX300039; Name=CX300039; organism=Citrus clementina; type=EST; length=399bpback to top |