CX300045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24_DICDI (60S ribosomal protein L24 OS=Dictyostelium discoideum GN=rpl24 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.244e-22 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 316 YP +G++F+R DS+VF F N+K + F ++ P + W+ +YR+ +K + KKK R TKK R+IVGA+LEVIQ++R +KPEV+ AA E A REIKE+ K Sbjct: 14 YPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKNTTTDVSAKKKARKTKK-VERNIVGASLEVIQQKRAQKPEVKQAAAEQAKREIKEKKK 117
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24_CANGA (60S ribosomal protein L24 OS=Candida glabrata GN=RPL24 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.614e-21 Identity = 51/108 (47.22%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 325 YPG+G F+R DS++F F NSK F R P ++ WT +YR+ HKK I E KK+ R T K R+IVGA+LE+I++RR+ KPEVR A R+ + KE+ K K Sbjct: 14 YPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAIVGASLELIKERRSLKPEVRKAKRDDKAKADKEKKKADK 120
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24A_YEAST (60S ribosomal protein L24-A OS=Saccharomyces cerevisiae GN=RPL24A PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.108e-21 Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 325 YPG+G F+R DS++F F NSK F R P ++ WT ++RK HKK I E KK+ R T K R I GA+L++I++RR+ KPEVR A RE L+ KE+ K K Sbjct: 14 YPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLKANKEKKKAEK 120
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24_KLULA (60S ribosomal protein L24 OS=Kluyveromyces lactis GN=RPL24 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.595e-21 Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 325 YPG+G F+R DS++F F +SK FH R P ++ WT +YR+ HKK I E +K+ R + K R++VGA+LE+I++RR+ KPEVR A R+ + KE+ K K Sbjct: 14 YPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVARKRTRKSVKA-QRAVVGASLELIKERRSLKPEVRKAQRDEKKKADKEKKKADK 120
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24B_YEAST (60S ribosomal protein L24-B OS=Saccharomyces cerevisiae GN=RPL24B PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.695e-21 Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 325 YPG+G F+R DS++F F NSK F R P ++ WT ++RK HKK I E KK+ R T K R I GA+L++I++RR+ KPEVR A RE L+ KE+ + K Sbjct: 14 YPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLKANKEKKRAEK 120
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24_BRABE (60S ribosomal protein L24 OS=Branchiostoma belcheri GN=RPL24 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.780e-20 Identity = 47/105 (44.76%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 316 YPG G R+ R+D +V+ F N+KC+ F + P ++TWT +YR++HKK E KK+ R T K + R+I GA+L I +R +KPEVR A RE A++ KE+ K Sbjct: 14 YPGHGKRYARTDGRVYTFLNAKCEASFLMKRNPREITWTVLYRRKHKKGQQEEIQKKRSRRTAK-FQRAITGASLTEIMAKRNQKPEVRKAQREQAVKAAKEKKK 117
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24_PLUXY (60S ribosomal protein L24 OS=Plutella xylostella GN=RpL24 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.855e-20 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 325 YPG G ++ D + F F NSKC+ R P K+TWT +YR++ KK E KK+ R T+K Y R+IVGA+L I +R KPEVR A RE A+++ KE+ K TK Sbjct: 14 YPGHGKTMVKVDGKNFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQK-YQRAIVGASLSDIMAKRNMKPEVRKAQREQAIKQAKEQKKSTK 120
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24_RAT (60S ribosomal protein L24 OS=Rattus norvegicus GN=Rpl24 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.510e-19 Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 325 YPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE A+R KE KK K Sbjct: 14 YPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKE-AKKAK 119
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24_MOUSE (60S ribosomal protein L24 OS=Mus musculus GN=Rpl24 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 1.510e-19 Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 325 YPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE A+R KE KK K Sbjct: 14 YPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKE-AKKAK 119
BLAST of CX300045 vs. ExPASy Swiss-Prot
Match: RL24_MACFA (60S ribosomal protein L24 OS=Macaca fascicularis GN=RPL24 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.510e-19 Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 2 YPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 325 YPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE A+R KE KK K Sbjct: 14 YPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKE-AKKAK 119 The following BLAST results are available for this feature:
BLAST of CX300045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300045 ID=CX300045; Name=CX300045; organism=Citrus clementina; type=EST; length=333bpback to top |