CX300057

Overview
NameCX300057
Unique NameCX300057
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11803 contig Ccv1_Contig11803:1106..1594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K4_MOUSE (Mitogen-activated protein kinase kinase kinase 4 OS=Mus musculus GN=Map3k4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.645e-15
Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYE-GVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            G   A DIWSLGC V+EM T K PW +YE     M+K+G   + P IP+ LS EGK F+  CL+ +P  R TA +LLDH FVK
Sbjct: 1510 GHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHK-PPIPERLSPEGKAFLSHCLESDPKIRWTASQLLDHAFVK 1591          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.454e-15
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 1
Query:    4 NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            +  G     D+WSLGCTV+EM T KPPW++YE +AA+FKI      P +P  +S+ G+DF+R         RP+A +LL H F +
Sbjct:  540 SGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHGRDFLRRIFV-EARQRPSAEELLTHHFAQ 623          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.454e-15
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 1
Query:    4 NSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            +  G     D+WSLGCTV+EM T KPPW++YE +AA+FKI      P +P  +S+ G+DF+R         RP+A +LL H F +
Sbjct:  540 SGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHGRDFLRRIFV-EARQRPSAEELLTHHFAQ 623          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K5_MOUSE (Mitogen-activated protein kinase kinase kinase 5 OS=Mus musculus GN=Map3k5 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 7.695e-15
Identity = 48/106 (45.28%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL*T 315
            K   G   A DIWSLGCT++EMAT KPP+ +  E  AAMFK+G  K  P IP+ +S E K FI  C + +P  R  A  LL   F+K ++  ++T   P+LS L T
Sbjct:  860 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLIDEFLKVSSKKKKT--QPKLSALST 963          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K5_HUMAN (Mitogen-activated protein kinase kinase kinase 5 OS=Homo sapiens GN=MAP3K5 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 1
Query:    1 KNSSGCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPELSRL 309
            K   G   A DIWSLGCT++EMAT KPP+ +  E  AAMFK+G  K  P IP+ +S E K FI  C + +P  R  A  LL   F+K ++  ++T   P+LS L
Sbjct:  853 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKT--QPKLSAL 954          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: STK3_DANRE (Serine/threonine-protein kinase 3 OS=Danio rerio GN=stk3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.819e-14
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 273
            G N   DIWSLG T +EMA  KPP++    + A+F I  +   PT   P+  SD+  DF++ CL +NP  R TA +LL HPF+ GA P+
Sbjct:  196 GYNCVADIWSLGITSIEMAEGKPPYADIHPMRAIFMIPTNPP-PTFRKPEHWSDDFTDFVKKCLVKNPEQRATATQLLQHPFIVGAKPV 283          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: STK3_XENLA (Serine/threonine-protein kinase 3 OS=Xenopus laevis GN=stk3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 273
            G N   DIWSLG T +EMA  KPP++    + A+F I  +   PT   P+  +DE  DF++ CL +NP  R TA +LL HPF+K A P+
Sbjct:  196 GYNCVADIWSLGITSIEMAEGKPPYADIHPMRAIFMIPTNPP-PTFRKPELWTDEFTDFVKKCLVKNPEQRATATQLLQHPFIKNAKPV 283          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: STK3_HUMAN (Serine/threonine-protein kinase 3 OS=Homo sapiens GN=STK3 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPL 273
            G N   DIWSLG T +EMA  KPP++    + A+F I  +   PT   P+  SD+  DF++ CL +NP  R TA +LL HPF+K A P+
Sbjct:  197 GYNCVADIWSLGITSIEMAEGKPPYADIHPMRAIFMIPTNPP-PTFRKPELWSDDFTDFVKKCLVKNPEQRATATQLLQHPFIKNAKPV 284          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K15_MOUSE (Mitogen-activated protein kinase kinase kinase 15 OS=Mus musculus GN=Map3k15 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.111e-13
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            G     DIWSLGCT++EMAT++PP+ +  E  AAMFK+G  K  P IP+ LS E + FI  C + +P  R TA  LL   F++
Sbjct:  831 GYGAPADIWSLGCTIIEMATSRPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFILSCFEPDPQKRVTAADLLQEGFLR 913          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K15_HUMAN (Mitogen-activated protein kinase kinase kinase 15 OS=Homo sapiens GN=MAP3K15 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.451e-13
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            G     DIWSLGCT++EMAT+KPP+ +  E  AAMFK+G  K  P IP+ LS E + FI  C + +P  R T  +LL   F++
Sbjct:  827 GYGAPADIWSLGCTIIEMATSKPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFILSCFEPDPHKRATTAELLREGFLR 909          
The following BLAST results are available for this feature:
BLAST of CX300057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
M3K4_MOUSE2.645e-1551.81Mitogen-activated protein kinase kinase kinase 4 O... [more]
M3K3_MOUSE3.454e-1543.53Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K3_HUMAN3.454e-1543.53Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K5_MOUSE7.695e-1545.28Mitogen-activated protein kinase kinase kinase 5 O... [more]
M3K5_HUMAN1.005e-1445.19Mitogen-activated protein kinase kinase kinase 5 O... [more]
STK3_DANRE3.819e-1444.94Serine/threonine-protein kinase 3 OS=Danio rerio G... [more]
STK3_XENLA6.515e-1444.94Serine/threonine-protein kinase 3 OS=Xenopus laevi... [more]
STK3_HUMAN6.515e-1444.94Serine/threonine-protein kinase 3 OS=Homo sapiens ... [more]
M3K15_MOUSE1.111e-1346.99Mitogen-activated protein kinase kinase kinase 15 ... [more]
M3K15_HUMAN1.451e-1346.99Mitogen-activated protein kinase kinase kinase 15 ... [more]

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Properties
Property NameValue
Genbank descriptionC07005F02SK SaltLeaf1 Citrus clementina cDNA clone C07005F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300057 ID=CX300057; Name=CX300057; organism=Citrus clementina; type=EST; length=489bp
AAGAACTCAAGTGGTTGCAATCTTGCTGTTGATATTTGGAGTCTTGGGTG
CACTGTTTTGGAAATGGCTACAACAAAACCACCTTGGAGCCAGTATGAAG
GGGTTGCTGCTATGTTTAAGATTGGGAATAGTAAGGAACTCCCAACAATT
CCAGATGACCTCTCTGATGAAGGAAAGGATTTTATTAGGTTGTGTTTGCA
ACGTAATCCCTTAAACCGTCCAACAGCAGTTAAGCTTTTGGATCACCCTT
TTGTGAAGGGTGCTGCACCTTTGGAAAGAACTATTTTGGCCCCTGAGCTG
AGTCGTTTGTGAACTCTACTCATCTTATTTTCAAATTCGTTTGGAGATCC
AAACGGAAGCTGTAGATGTTATTACACAACTCGTTTGTGTCGTCGTTTCA
TGTTTTGAAAATTTGAAAATAAGATGAGTAGTGTTCACGACAGCGTCGAG
ACCGTTTACGCCGCTGCAACTGCCATAGTTTCAGCTGAG
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