CX300057

Overview
NameCX300057
Unique NameCX300057
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: STK4_HUMAN (Serine/threonine-protein kinase 4 OS=Homo sapiens GN=STK4 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 2.737e-12
Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA 264
            G N   DIWSLG T +EMA  KPP++    + A+F I  +   PT   P+  SD   DF++ CL ++P  R TA +LL HPFV+ A
Sbjct:  200 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP-PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 284          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: WIS4_SCHPO (MAP kinase kinase kinase wis4 OS=Schizosaccharomyces pombe GN=wis4 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.575e-12
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1
Query:   25 AVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIP--DDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 255
            A+DIWSLGC +LEM T   PWS+ +   A+     +   P+IP  + +S   +DFI  C +R+P  RP AV LL HP++
Sbjct: 1228 AMDIWSLGCVILEMMTGSTPWSEMDNEWAIMYHVAAMHTPSIPQNEKISSLARDFIEQCFERDPEQRPRAVDLLTHPWI 1306          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: CST1_CAEEL (Serine/threonine-protein kinase cst-1 OS=Caenorhabditis elegans GN=cst-1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.669e-12
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA 264
            G +   DIWSLG T +EMA  +PP+S    + A+F I  +K  PT   P++ S E  DFIR CL + P  R TA++L +H F+K A
Sbjct:  205 GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP-TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: PAKB_DICDI (Serine/threonine-protein kinase pakB OS=Dictyostelium discoideum GN=pakB PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.097e-12
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 1
Query:   28 VDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDD--LSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGA 264
            VDIWSLG   +EMA ++PP+  +  + A+F I  +K +P + D    SD+ KDF++ CL ++  NRP A  LL+HPF+K A
Sbjct:  747 VDIWSLGIMAMEMAESEPPYMSFPPLRALFLI-TTKGIPDLKDQNKWSDDFKDFVKKCLDKDVENRPEAKVLLNHPFLKTA 826          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: HIPPO_DROME (Serine/threonine-protein kinase hippo OS=Drosophila melanogaster GN=hpo PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTILAPEL 300
            G +   DIWSLG T LEMA  KPP+ +   + A+F I   K  P+   PD  S E  DF+  CL + P +R TA +LL+H F++ A    R+IL P L
Sbjct:  212 GYDCVADIWSLGITALEMAEGKPPYGEIHPMRAIFMI-PQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRATATELLEHEFIRNAK--HRSILKPML 306          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: STK10_HUMAN (Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.026e-11
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 1
Query:   31 DIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 255
            DIWSLG T++EMA  +PP  +   +  + KI  S + PT+  P   S E +DF+++ L +NP  RP+A +LL+HPFV
Sbjct:  219 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 294          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: M3K6_MOUSE (Mitogen-activated protein kinase kinase kinase 6 OS=Mus musculus GN=Map3k6 PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 3.026e-11
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query:   13 GCNLAVDIWSLGCTVLEMATTKPPWSQY-EGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVK 258
            G   A DIWSLGCTV+EMAT +PP+ +     AAMF++G  K  P +P  LS E + F+    + +P  R +A +LL  PF++
Sbjct:  826 GYGKAADIWSLGCTVIEMATGRPPFHELGSPQAAMFQVGMYKVHPPVPGSLSAEAQAFLLRTFEPDPRLRASAQELLGDPFLQ 908          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 1
Query:    7 SSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 255
            S  C ++ DIWSLGCT++E+ T+ PP+     + AM++I    + P +PDD+S E  +F+  C  ++   R TA +LL HP++
Sbjct:  249 SGHCQVS-DIWSLGCTIIELFTSYPPYFDLNPLGAMYRICQD-DRPPLPDDISSELANFLERCFCKSTEERATAKELLSHPWI 329          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: SID1_SCHPO (Serine/threonine-protein kinase sid1 OS=Schizosaccharomyces pombe GN=sid1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 1
Query:   22 LAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFVKGAAPLERTI 285
            LA DIWSLG T +EMA   PP +    +  +F+I  S E P + D  S   +DF+  CL  NP  R +A +LL HPF+K A  ++  I
Sbjct:  184 LAADIWSLGITAIEMANGIPPRATMHPMRVIFEIPQS-EPPKLDDHFSPTFRDFVSCCLDLNPNMRWSAKELLQHPFIKSAGTVKDII 270          
BLAST of CX300057 vs. ExPASy Swiss-Prot
Match: STK10_MOUSE (Serine/threonine-protein kinase 10 OS=Mus musculus GN=Stk10 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.162e-11
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 1
Query:   31 DIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTI--PDDLSDEGKDFIRLCLQRNPLNRPTAVKLLDHPFV 255
            DIWSLG T++EMA  +PP  +   +  + KI  S + PT+  P   S E +DF+++ L +NP  RP+A +LL HPFV
Sbjct:  219 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLQHPFV 294          
The following BLAST results are available for this feature:
BLAST of CX300057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
STK4_HUMAN2.737e-1244.19Serine/threonine-protein kinase 4 OS=Homo sapiens ... [more]
WIS4_SCHPO3.575e-1243.04MAP kinase kinase kinase wis4 OS=Schizosaccharomyc... [more]
CST1_CAEEL4.669e-1244.19Serine/threonine-protein kinase cst-1 OS=Caenorhab... [more]
PAKB_DICDI6.097e-1244.44Serine/threonine-protein kinase pakB OS=Dictyostel... [more]
HIPPO_DROME1.040e-1142.86Serine/threonine-protein kinase hippo OS=Drosophil... [more]
STK10_HUMAN3.026e-1144.16Serine/threonine-protein kinase 10 OS=Homo sapiens... [more]
M3K6_MOUSE3.026e-1143.37Mitogen-activated protein kinase kinase kinase 6 O... [more]
Y0146_DICDI3.952e-1138.55Probable serine/threonine-protein kinase DDB_G0270... [more]
SID1_SCHPO3.952e-1142.05Serine/threonine-protein kinase sid1 OS=Schizosacc... [more]
STK10_MOUSE5.162e-1144.16Serine/threonine-protein kinase 10 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionC07005F02SK SaltLeaf1 Citrus clementina cDNA clone C07005F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300057 ID=CX300057; Name=CX300057; organism=Citrus clementina; type=EST; length=489bp
AAGAACTCAAGTGGTTGCAATCTTGCTGTTGATATTTGGAGTCTTGGGTG
CACTGTTTTGGAAATGGCTACAACAAAACCACCTTGGAGCCAGTATGAAG
GGGTTGCTGCTATGTTTAAGATTGGGAATAGTAAGGAACTCCCAACAATT
CCAGATGACCTCTCTGATGAAGGAAAGGATTTTATTAGGTTGTGTTTGCA
ACGTAATCCCTTAAACCGTCCAACAGCAGTTAAGCTTTTGGATCACCCTT
TTGTGAAGGGTGCTGCACCTTTGGAAAGAACTATTTTGGCCCCTGAGCTG
AGTCGTTTGTGAACTCTACTCATCTTATTTTCAAATTCGTTTGGAGATCC
AAACGGAAGCTGTAGATGTTATTACACAACTCGTTTGTGTCGTCGTTTCA
TGTTTTGAAAATTTGAAAATAAGATGAGTAGTGTTCACGACAGCGTCGAG
ACCGTTTACGCCGCTGCAACTGCCATAGTTTCAGCTGAG
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