CX300060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.377e-17 Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 3 SHEGCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 S + C GVR+LN AA TTPDRQAACNCLK A G+I + N AA LP +C V IPYKIS ST+C+ +R Sbjct: 48 SAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.055e-17 Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 203 C+ VR LN AARTT D++ AC CLK+ + G+ N AAGLP++CGV IPYKISP+TDC+RV Sbjct: 57 CNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.296e-17 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C+G+R++N A+TT DRQ ACNCLK+ ++ G+ N AA LP +CGV +PYKISPST+C+ V+ Sbjct: 54 CNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.296e-17 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 3 SHEGCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 S + C GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 42 SPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.917e-17 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C GV++L G+A+TT DR+ AC CLK A I+GI N AAG+PS C V IPYKISPSTDCS V+ Sbjct: 51 CGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.034e-17 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 3 SHEGCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 S + C GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 50 SPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.034e-17 Identity = 40/64 (62.50%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C GV+ L GAA+T DR+ AC CLK A +I+GI AAGLP CGV IPYKISPSTDCS V+ Sbjct: 51 CGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.034e-17 Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C GV+ L G+A+TT DR+ AC CLK A I+GI N AAG+PS C V IPYKISPSTDCS V+ Sbjct: 51 CGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.180e-16 Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 3 SHEGCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 S + C GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS +T+C+ V+ Sbjct: 50 SPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.541e-16 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C GV+ L GAA++ DR+ AC CLK A I+GI AAGLP CGV IPYKISPSTDCS+V+ Sbjct: 51 CGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114 The following BLAST results are available for this feature:
BLAST of CX300060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300060 ID=CX300060; Name=CX300060; organism=Citrus clementina; type=EST; length=422bpback to top |