CX300060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 203 CSGV+ L G AR+T D+QA C CLK G + AAG+PS+CGV +PY IS S DCS++ Sbjct: 55 CSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGR---AAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 206 C+GV +L A TTPDRQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C+ VR Sbjct: 54 CNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 203 CSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 58 CSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 203 CSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 58 CSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV----AAGLPSQCGVRIPYKISPSTDCSRVR 206 C+GV LN ARTTPDRQ AC CL+ A R + PN+ AAG+P CGV +P+ IS +T+C+ V+ Sbjct: 54 CTGVSKLNSMARTTPDRQQACRCLETA---ARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.700e-12 Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 3 Query: 15 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 203 C GV+SL A+TTPDR+ C CLK A I+G+ ++ A LP+ CGV IPY IS ST+C + Sbjct: 53 CVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CX300060 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.325e-11 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 3 SHEGCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 203 S + C GV++L+ AR+ DRQ+ACNCLK I + + A +P +CGV +PY IS + DCSRV Sbjct: 47 SGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113 The following BLAST results are available for this feature:
BLAST of CX300060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300060 ID=CX300060; Name=CX300060; organism=Citrus clementina; type=EST; length=422bpback to top |