CX300062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCA1_DICDI (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=isca1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.166e-12 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 185 KPAILLTENALKHLNKMRSERSEDLC--LRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 K +T++ALK + ++ +++ D C LR+G+K+ GCSGMSYT++F + N + D++V+ I+ D K+LL + G ++DY + I F F NPNA Sbjct: 15 KAIFSMTDSALKRVKEIMNDKKIDNCIGLRLGIKERGCSGMSYTLDFATQKN-KFDETVVADKDINIIVDSKALLSVIGTEMDYIEEPIKKEFIFINPNA 113
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_XANC5 (Iron-sulfur cluster insertion protein erpA OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=erpA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.166e-12 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 212 ALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 A K ++ E + DL LR+ ++ GGCSG Y EF ENRA DD + DG ++ DP SL +L G ++DY+++L G F +NPNA Sbjct: 30 AAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNA 116
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_XANAC (Iron-sulfur cluster insertion protein erpA OS=Xanthomonas axonopodis pv. citri GN=erpA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.166e-12 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 212 ALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 A K ++ E + DL LR+ ++ GGCSG Y EF ENRA DD + DG ++ DP SL +L G ++DY+++L G F +NPNA Sbjct: 30 AAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNA 116
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_XANOR (Iron-sulfur cluster insertion protein erpA OS=Xanthomonas oryzae pv. oryzae GN=erpA PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.523e-12 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 212 ALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 A K ++ E + DL LR+ ++ GGCSG Y EF ENRA DD + DG ++ DP SL +L G ++DY+++L G F +NPNA Sbjct: 30 AAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVVTDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNA 116
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_XANOM (Iron-sulfur cluster insertion protein erpA OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=erpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.523e-12 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 212 ALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 A K ++ E + DL LR+ ++ GGCSG Y EF ENRA DD + DG ++ DP SL +L G ++DY+++L G F +NPNA Sbjct: 30 AAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVVTDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNA 116
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_STRM5 (Iron--sulfur cluster insertion protein erpA OS=Stenotrophomonas maltophilia (strain R551-3) GN=erpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.523e-12 Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 176 EELKPAILLTENALKHLNKMRSERSE-DLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 + L+ + TE+A + + E DL LR+ ++ GGCSG Y EF ENRA DD ++ G ++ DP SL +L G ++DY+++L G F +NPNA Sbjct: 19 QSLERPLNFTESAAAKVKSLIQEEGNLDLALRVYIEGGGCSGFQYGFEFDENRAE---DDLAVQTSGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNA 118
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCA_YERPY (Iron-binding protein iscA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=iscA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.989e-12 Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 191 AILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN 475 +I ++++A + ++ + R + L LR+GV+ GCSGM+Y +EF + N DD V E G ++ D KS+++L G +LD+ + GF F NPN Sbjct: 2 SISISDSAAQRVSAFLNHRGKGLGLRLGVRTSGCSGMAYVLEFVDEIN--DDDIVFEDKGVKVIIDGKSMVYLDGTELDFVKEGLNEGFKFNNPN 94
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCA_YERPS (Iron-binding protein iscA OS=Yersinia pseudotuberculosis GN=iscA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.989e-12 Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 191 AILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN 475 +I ++++A + ++ + R + L LR+GV+ GCSGM+Y +EF + N DD V E G ++ D KS+++L G +LD+ + GF F NPN Sbjct: 2 SISISDSAAQRVSAFLNHRGKGLGLRLGVRTSGCSGMAYVLEFVDEIN--DDDIVFEDKGVKVIIDGKSMVYLDGTELDFVKEGLNEGFKFNNPN 94
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCA_YERPP (Iron-binding protein iscA OS=Yersinia pestis (strain Pestoides F) GN=iscA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.989e-12 Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 191 AILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN 475 +I ++++A + ++ + R + L LR+GV+ GCSGM+Y +EF + N DD V E G ++ D KS+++L G +LD+ + GF F NPN Sbjct: 2 SISISDSAAQRVSAFLNHRGKGLGLRLGVRTSGCSGMAYVLEFVDEIN--DDDIVFEDKGVKVIIDGKSMVYLDGTELDFVKEGLNEGFKFNNPN 94
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCA_YERPN (Iron-binding protein iscA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=iscA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.989e-12 Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 191 AILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN 475 +I ++++A + ++ + R + L LR+GV+ GCSGM+Y +EF + N DD V E G ++ D KS+++L G +LD+ + GF F NPN Sbjct: 2 SISISDSAAQRVSAFLNHRGKGLGLRLGVRTSGCSGMAYVLEFVDEIN--DDDIVFEDKGVKVIIDGKSMVYLDGTELDFVKEGLNEGFKFNNPN 94 The following BLAST results are available for this feature:
BLAST of CX300062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300062 ID=CX300062; Name=CX300062; organism=Citrus clementina; type=EST; length=479bpback to top |