CX300062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_XANC8 (Iron-sulfur cluster insertion protein erpA OS=Xanthomonas campestris pv. campestris (strain 8004) GN=erpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.394e-12 Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 212 ALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 A K ++ E + +L LR+ ++ GGCSG Y EF ENRA DD + DG ++ DP SL +L G ++DY+++L G F +NPNA Sbjct: 30 AAKVRELIQEEGNAELALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNA 116
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCA_ENT38 (Iron-binding protein iscA OS=Enterobacter sp. (strain 638) GN=iscA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.432e-12 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 191 AILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN 475 +I L+++A ++ R + LR+GV+ GCSGM+Y +EF + DD+V E G +V D KSL FL G QLD+ + GF F NPN Sbjct: 2 SITLSDSAAARVSSFLENRGKGYGLRLGVRTSGCSGMAYVLEFVDEPAT--DDTVFEDKGVKVVIDGKSLQFLDGTQLDFVKEGLNEGFKFTNPN 94
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_THIDA (Putative iron-sulfur cluster insertion protein erpA OS=Thiobacillus denitrificans (strain ATCC 25259) GN=erpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.432e-12 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 173 TEELKPAILLTENALKHLNKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 T E++ ++ T++A + + E DL LR+ V GGCSG Y F+ NA DD+V+ +G ++ D S +L G ++DYS+ L G F KNPNA Sbjct: 4 TTEMESPLVFTDSAASKVKSLIDEEGNPDLKLRVFVSGGGCSGFQYGFTFDEAQNA--DDTVMVKNGVTLLVDSMSFQYLVGAEIDYSEGLEGAQFVIKNPNA 104
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_ACIF5 (Iron--sulfur cluster insertion protein erpA OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=erpA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.789e-12 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 176 EELKPAILLTENAL-KHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 + + P + LT+NA K + + E S+DL LR+ V GGCSG Y F+ N D+ + G ++ DP S +L G ++DYS+ L G F KNPNA Sbjct: 13 DSIPPVMTLTQNAADKIASLIEEEGSDDLKLRVFVTGGGCSGFQYGFTFDENMNE--GDTEVHQLGVSLLIDPMSYQYLVGAEIDYSEGLEGAQFVIKNPNA 112
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_ACIF2 (Iron--sulfur cluster insertion protein erpA OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=erpA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.789e-12 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 176 EELKPAILLTENAL-KHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 + + P + LT+NA K + + E S+DL LR+ V GGCSG Y F+ N D+ + G ++ DP S +L G ++DYS+ L G F KNPNA Sbjct: 13 DSIPPVMTLTQNAADKIASLIEEEGSDDLKLRVFVTGGGCSGFQYGFTFDENMNE--GDTEVHQLGVSLLIDPMSYQYLVGAEIDYSEGLEGAQFVIKNPNA 112
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ISCA_PROMH (Iron-binding protein iscA OS=Proteus mirabilis (strain HI4320) GN=iscA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.560e-12 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 2 Query: 191 AILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN 475 +I LTE A + + R + LR+GV+ GCSGM+Y +EF + N +D+V E G ++ D KS+++L G +LD+ + GF F NPN Sbjct: 2 SISLTEAAANRVRSFLANRGKGEGLRLGVRTSGCSGMAYVLEFADVIN--DEDTVFEDKGVKVIIDGKSMVYLDGTELDFVKEGLNEGFKFNNPN 94
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_HAHCH (Iron-sulfur cluster insertion protein erpA OS=Hahella chejuensis (strain KCTC 2396) GN=erpA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.560e-12 Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 2 Query: 173 TEELKPAILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 T E P I A K + + E +++L LR+ V GGCSG Y F+ N DD+++E DG +V D S +L G ++D+ + L G F KNPNA Sbjct: 6 TYEPTPIIFTDNAAAKVKSLIEDEGNDELSLRVFVTGGGCSGFQYGFSFDEAVN--EDDTIVEKDGVRLVVDSLSYQYLVGAEVDFREGLEGAQFVIKNPNA 105
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_ALHEH (Iron-sulfur cluster insertion protein erpA OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=erpA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.560e-12 Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 2 Query: 173 TEELKPAILLTENALKHLNKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 TE+ + ++ A + + E S+DL LR+ V GGCSG Y F+ R DSV+E DG + DP S +L G ++D+ + + G F +NPNA Sbjct: 11 TEDFQALVVTDSAAARVAQLIAQEESDDLKLRVFVSGGGCSGFQYGFTFDERIEE--GDSVVEKDGVTFLVDPMSSQYLMGAEIDFVEGIEGEQFVIRNPNA 110
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: Y484_RICPR (Uncharacterized protein RP484 OS=Rickettsia prowazekii GN=RP484 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.684e-11 Identity = 34/99 (34.34%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 182 LKPAILLTENALKHLNKMRSERSEDLC-LRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN 475 +K I LT+ A K + + +R++ +R+G+K GGC+G +Y +E+ + N D V+E G I+ DPK+L+++ G ++DY + F+F NPN Sbjct: 1 MKNVISLTDAAAKQVKLLIEKRAKPTFGIRVGIKSGGCAGQTYYVEYADNKNQF--DEVVEEKGVRILIDPKTLMYILGSEMDYVETNFKSQFTFTNPN 97
BLAST of CX300062 vs. ExPASy Swiss-Prot
Match: ERPA_CHRVO (Putative iron-sulfur cluster insertion protein erpA OS=Chromobacterium violaceum GN=erpA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.684e-11 Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 2 Query: 179 ELKPAILLTENALKHLNKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNA 478 E+ I TE+A + + +E DL LR+ V GGCSG Y F+ AN DD+ IE G + DP S +L G ++DY ++L G F +NPNA Sbjct: 7 EMPSPINFTESACAKVQDLIAEEGNPDLKLRVFVTGGGCSGFQYGFTFDEIANE--DDTAIERQGVTFLVDPMSYQYLVGAEIDYQESLEGSQFVIRNPNA 105 The following BLAST results are available for this feature:
BLAST of CX300062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300062 ID=CX300062; Name=CX300062; organism=Citrus clementina; type=EST; length=479bpback to top |