CX300068

Overview
NameCX300068
Unique NameCX300068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length524
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12
Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 3
Query:  108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509
            +VT    IE+ +    +++G++DI+ NNAGI  +     + +D  E+  ++  NL  VF  +K   R M     G II+  SV G +G      Y ++K G++G  K+ A E+   GI VN V+P  + T + +
Sbjct:   59 NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12
Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 3
Query:  108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509
            +VT    IE+ +    +++G++DI+ NNAGI  +     + +D  E+  ++  NL  VF  +K   R M     G II+  SV G +G      Y ++K G++G  K+ A E+   GI VN V+P  + T + +
Sbjct:   59 NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: CBR4_MOUSE (Carbonyl reductase family member 4 OS=Mus musculus GN=Cbr4 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12
Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = 3
Query:  105 CDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELV-LSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509
            CDV KE+++++         G ++ + N AGI    + ++L   + E  +  L  NL+G  L  K A + M   G GSI++  S+ G+ G V   AY+++K G+VG  ++ A E+ R  IRVN V+P  + T + +
Sbjct:   55 CDVAKEQDVQSTFQEMEKHLGPVNFLVNAAGI---NRDSLLVRTKTEDMISQLHTNLLGSMLTCKAAMKTMIQQG-GSIVNVGSIIGLKGNVGQSAYSATKGGLVGFSRSLAKEVARKKIRVNVVAPGFIRTDMTR 186          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: BUDC_KLEPN (Acetoin(diacetyl) reductase OS=Klebsiella pneumoniae GN=budC PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12
Identity = 52/166 (31.33%), Postives = 75/166 (45.18%), Query Frame = 3
Query:    9 VLIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGS-IISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503
            V IAD  D   ++V  +I      A     V  DV+   ++  AV  A    G  D++ NNAG+        +  +  +   V ++N+ GV  G + A    K  G G  II+  S  G +G      Y+SSK  V GL + AA +L   GI VN   P +V TP+
Sbjct:   29 VAIADYNDATAKAVASEINQAGGRAMA---VKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD--KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM 189          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 40/120 (33.33%), Postives = 72/120 (60.00%), Query Frame = 3
Query:  141 VNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAAR-VMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVAT 497
            V  AV+++GK+DI+ NNAGI+   + + ++  +  ++ V+++N+  VF  ++  AR  +K    G II+ AS+    GG+   +YT+SK  V+G+ +  A E  +  I VN ++P  +AT
Sbjct:   76 VEKAVAEFGKVDILVNNAGII--RREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGHGGKIINIASMLSFQGGIPVPSYTASKKRVMGITRIVANEWAKHNINVNAIAPGYMAT 193          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 3
Query:  108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509
            +VT  + IE  + T   + G +DI+ NNAGI  +     + +D  E+  +++ NL  ++  +K   R M     G II+  SV G +G      Y ++K GV+G  K+ A E+   G+ VN V+P  + T + K
Sbjct:   59 NVTDVESIEATLKTINDECGAIDILVNNAGITRDNLLMRMKDD--EWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK 190          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 41/134 (30.60%), Postives = 70/134 (52.24%), Query Frame = 3
Query:  108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509
            +VT    IE+ +    +++G++DI+ NNAGI  +  + ++     E+  ++  NL  VF  +K   R M     G II+  SV G +G      Y ++K G++G  K+ A E+   GI VN V+P  + T + +
Sbjct:   59 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 41/134 (30.60%), Postives = 70/134 (52.24%), Query Frame = 3
Query:  108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509
            +VT    IE+ +    +++G++DI+ NNAGI  +  + ++     E+  ++  NL  VF  +K   R M     G II+  SV G +G      Y ++K G++G  K+ A E+   GI VN V+P  + T + +
Sbjct:   59 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: HCDS_XANP2 (2-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecE PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.177e-12
Identity = 47/132 (35.61%), Postives = 67/132 (50.76%), Query Frame = 3
Query:   99 VHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVA 494
            V  DVT E  I  A+  A    G L  + NNAGI      ++   +   +  +++VN+ G FL +K A   M   GRG+I++  SV G++G     AY ++K  VV L +  A +    GIRVN V P  VA
Sbjct:   55 VGADVTDEAAITAAMAGAQRALGPLTGLVNNAGIAGFG--SVHATEVETWSRIMAVNVTGTFLASKAALFGMLERGRGAIVNFGSVAGLVGIPTMAAYCAAKGAVVNLTRQMAADYSGRGIRVNVVCPGTVA 184          
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.177e-12
Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 3
Query:  105 CDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVAT 497
            C V K ++ E  V  AV+ +G +DI+ +NA  V+    NI+D  +  ++ +L VN+    L TK     M+  G GS++  +SV           Y  SK  ++GL KN AVEL    IRVNC++P ++ T
Sbjct:   70 CHVGKAEDRERLVAMAVNLHGGVDILVSNAA-VNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKT 199          
The following BLAST results are available for this feature:
BLAST of CX300068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
FABG_SALTY4.207e-1231.343-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI4.207e-1231.343-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
CBR4_MOUSE4.207e-1232.35Carbonyl reductase family member 4 OS=Mus musculus... [more]
BUDC_KLEPN4.207e-1231.33Acetoin(diacetyl) reductase OS=Klebsiella pneumoni... [more]
KDUD_DICD35.495e-1233.332-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=D... [more]
FABG_VIBHA5.495e-1231.343-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_SHIFL5.495e-1230.603-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI5.495e-1230.603-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
HCDS_XANP27.177e-1235.612-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
DHRS4_PIG7.177e-1235.11Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]

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Properties
Property NameValue
Genbank descriptionC07005G01SK SaltLeaf1 Citrus clementina cDNA clone C07005G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300068 ID=CX300068; Name=CX300068; organism=Citrus clementina; type=EST; length=524bp
GCACGAGGGTACTCATTGCAGATATTAAAGATGACTTAGGCGAGTCTGTA
TGCAAGGACATAGGCTCTTCATCATCATCAGCCAACGGCTGCTCCTATGT
CCATTGTGATGTAACCAAAGAGAAAGAAATCGAAAACGCCGTTAACACGG
CCGTCTCCCAGTACGGAAAGCTAGACATTATGTTCAATAACGCCGGCATT
GTGGATGAAGCCAAACATAACATTCTGGATAATGATCAGGCTGAATTTGA
GCTCGTACTTTCCGTTAACCTCGTGGGCGTATTTTTGGGGACGAAACATG
CTGCGAGGGTGATGAAACCCGCCGGACGCGGCAGCATAATTTCAACTGCA
AGCGTTTGCGGAGTCATTGGTGGCGTTGCATCGCATGCATACACAAGTTC
GAAGCACGGCGTTGTGGGGCTGATGAAGAATGCTGCCGTGGAGCTTGGAC
GATTTGGCATTAGGGTGAATTGTGTGTCACCTTATGTGGTCGCAACTCCA
TTGGCAAAGGATTTTTACAAGCTT
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