CX300068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: YHDF_BACSU (Uncharacterized oxidoreductase yhdF OS=Bacillus subtilis GN=yhdF PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11 Identity = 46/138 (33.33%), Postives = 67/138 (48.55%), Query Frame = 3 Query: 90 CSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 C + DV E E AV V +GKLDI+ NNA + +IL+ + E N+ +F TK A ++ +II+T S+ G A Y+S+K +V ++ A L GIRVN V+P + TPL Sbjct: 97 CLLIPGDVGDENHCEQAVQQTVDHFGKLDILVNNAA-EQHPQDSILNISTEQLEKTFRTNIFSMFHMTKKALPHLQEGC--AIINTTSITAYEGDTALIDYSSTKGAIVSFTRSMAKSLADKGIRVNAVAPGPIWTPL 231
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11 Identity = 41/135 (30.37%), Postives = 69/135 (51.11%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAKD 512 DVT ++E+ V ++G++DI+ N+AG++ + I + D +E ++ VN+ G M G II+ AS+ G S Y++SK V + + EL + G+RV +SP +V TPL+ D Sbjct: 64 DVTHKEEVTELVEKTKEKFGQIDILVNSAGLMLSSA--ITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPLSGD 196
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11 Identity = 42/132 (31.82%), Postives = 65/132 (49.24%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 DV + ++ +TA +G L I+ NNAG+ D + E++ + VN G FL ++ AA+ + G G II+ +S + AYT+SK V + + A EL I NCV+P VAT + Sbjct: 85 DVAEPSQVAQLFDTAEHAFGPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRVVRGGGGRIINISSSLVAMPIPRYGAYTASKAAVEMMTRILAQELRGTQITANCVAPGPVATDM 216
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.075e-11 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 99 VHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAKDF 515 V DVTK++E++ + A +G LDI+ N+AG + +K I D E++ ++ VN+ G K A M G +I+ AS+ G +S Y+++K V + + EL + G++V +SP +V T + + Sbjct: 58 VPTDVTKKEEVDELIKMAQQTFGGLDIVINSAGQMLSSK--ITDYQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITATY 194
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.075e-11 Identity = 41/125 (32.80%), Postives = 62/125 (49.60%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSP 482 +++ E++ A + +DI+ NNAGI + + A+++ VL VNL VF T+ M G II+ SV GV G Y +SK G++G K+ A E+ I VNCV+P Sbjct: 60 NLSNRDEVKALGQKAEADLEGVDILVNNAGITKDGL--FVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAP 182
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509 DVT + + + V G +DI+ NNAGI A + + + +++ ++S N+ VF + AR M P GRG I++ SV + YT++K V L K A + GR G+++N ++P AT + + Sbjct: 68 DVTDQDAVIDGVAAIERDMGPIDILINNAGIQRRAP--LEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTE 199 The following BLAST results are available for this feature:
BLAST of CX300068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300068 ID=CX300068; Name=CX300068; organism=Citrus clementina; type=EST; length=524bpback to top |