CX300068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: HCD2_BOVIN (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taurus GN=HSD17B10 PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 3.929e-18 Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 12 LIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQA----EFELVLSVNLVGVFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 ++ D+ + GE+ K +G C++ DVT EK+++ A+ A ++G++D+ N AGI +K L QA +F+ V++VNL+G F + A M + RG II+TASV G V AY++SK G+VG+ A +L GIRV ++P + TPL Sbjct: 38 VLLDLPNSDGETQAKKLG------KSCAFAPADVTSEKDVQAALTLAREKFGRVDVAVNCAGIAVASKTYNLKKSQAHTLEDFQRVINVNLIGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPMGIRVMTIAPGLFGTPL 205
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.131e-18 Identity = 48/132 (36.36%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 DV+KE +++ + TAV +G +D++ NNAGI + ++ +++++ V+ +NL GVFL T+ A ++M +G II+ ASV G+IG + Y ++K GV+G K AA E I VN V P +A+ + Sbjct: 143 DVSKEADVDAMMKTAVDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 272
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 5.131e-18 Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509 D+T + AV T +YG+LD+M NNAGI + + + + +F+ ++ +N+ GVF G A + MK A +G II+TASV G+ G ++ Y +SK GV+GL E+ R IRV V+P VV T + K Sbjct: 65 DLTSRDAVMAAVGTVAQKYGRLDVMINNAGITMNSVFSRVSEE--DFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMTK 196
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: HCD2_HUMAN (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens GN=HSD17B10 PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 6.702e-18 Identity = 60/174 (34.48%), Postives = 91/174 (52.30%), Query Frame = 3 Query: 12 LIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQA----EFELVLSVNLVGVFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 ++ D+ + GE+ K +G N C + DVT EK+++ A+ A ++G++D+ N AGI +K L Q +F+ VL VNL+G F + A M + RG II+TASV G V AY++SK G+VG+ A +L GIRV ++P + TPL Sbjct: 38 VLLDLPNSGGEAQAKKLG------NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 205
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: HCDR_XANP2 (2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 8.752e-18 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 99 VHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAE-FELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509 V DV E ++ A+ + Q+G +D++ NNAGI ++ +L E F+ V++VN+ G+FLG + M G G I++ ASV ++ AYT+SK V+ L K+ AV+ GIR N V P ++ TP+ + Sbjct: 57 VRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: HCD2_RAT (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus GN=Hsd17b10 PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 1.143e-17 Identity = 59/174 (33.91%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 12 LIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQA----EFELVLSVNLVGVFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 ++ D+ + GE+ K +G C + +VT EKE++ A+ A ++G++D+ N AGI K +Q +F+ V++VNL+G F + A VM + RG II+TASV G V AY++SK G+VG+ A +L GIRV ++P + ATPL Sbjct: 38 VLLDVPNSEGETEAKKLG------GNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 205
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.547e-17 Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509 +VT +I+ V V +YG++D++ NNAGI +A ++ + +++ V++VNL GVF T+ M GSI++ +SV G+ G Y +SK GV+G+ K A EL IRVN V+P + TP+ + Sbjct: 62 NVTDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDAL--LVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTE 193
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.326e-17 Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 6 RVLIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSP 482 +V I DI ++ G+ + I A +++ DV K+ E V V +G+LDI+ NNAGIV NI + + +F+ ++VN+ G FL +K+A MK G G I++ +S G+IG Y+ SK ++GL ++ AV+ +GIRVN V P Sbjct: 31 KVAINDISEEKGKETVELIKSMGGEA---AFIFGDVAKDAE--QIVKKTVETFGRLDILVNNAGIVPYG--NIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCP 182
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.673e-17 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDN-DQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 D+T + AV +YG+LD+M NNAGI +N+ + EF+ ++ +N+ GVF G A + MK A +G II+TASV G+ G ++ Y +SK V+GL E+ R IRV V+P VV T + Sbjct: 65 DLTSRDAVMAAVGQVAQKYGRLDVMINNAGITS---NNVFSRVSEEEFKHIMDINVTGVFNGAWCAYQCMKDAKKGVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDM 194
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 7.409e-17 Identity = 44/138 (31.88%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 99 VHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAKD 512 V +V E++ + T + ++ ++D++ NNAGI + +L +++ V+ +NL GVFL TK +++M G II+ SV G++G Y+++K GV+G K A EL G+ VN V+P +AT + ++ Sbjct: 61 VQANVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTL--LLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMTEN 196 The following BLAST results are available for this feature:
BLAST of CX300068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300068 ID=CX300068; Name=CX300068; organism=Citrus clementina; type=EST; length=524bpback to top |