CX300068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: HCD2_MOUSE (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus GN=Hsd17b10 PE=1 SV=4) HSP 1 Score: 85.8853 bits (211), Expect = 1.264e-16 Identity = 60/176 (34.09%), Postives = 92/176 (52.27%), Query Frame = 3 Query: 12 LIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIV------DEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 ++ D+ D GES K +G C + +VT EKEI+ A+ A ++G++D+ N AGI + K+ I + +F+ V++VNL+G F + A M + RG II+TASV G V AY++SK G+ G+ A +L GIRV ++P + ATPL Sbjct: 38 VLLDVPDSEGESQAKKLG------ESCIFAPANVTSEKEIQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHQKKNKI--HTLEDFQRVINVNLIGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIDGMTLPIARDLAPTGIRVVTIAPGLFATPL 205
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.651e-16 Identity = 46/132 (34.85%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 108 DVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 DV+KE +++ + TAV ++G +D++ NNAG ++ +++++ V+ +NL GVFL ++ A ++M +G II+ ASV G+IG + Y ++K GV+G K AA E I VN V P +A+ + Sbjct: 72 DVSKEADVDAMMKTAVDKWGTIDVVVNNAGDT-----LLIRMKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 198
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 2.156e-16 Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = 3 Query: 99 VHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVAT----PLAKD 512 V DV+ ++++N + +S + +DI+ NNAGI + + I+ + E++ V+++NL GVF TK R M G II+ +S+ GV G Y ++K GV+GL K++A EL I VN ++P ++T LAKD Sbjct: 59 VKADVSNPEDVQNMIKETLSVFSTIDILVNNAGITRD--NLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKD 198
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.816e-16 Identity = 56/166 (33.73%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 6 RVLIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 RV+I DI D E I A H DV+ E ++ + G +DI+FNNAG VD+ + + F+ +++V+L G FL +K+ +M G GSII+T+S+ G + Y ++K G+ L K A++ R GIRVN +SP + TPL Sbjct: 32 RVIIGDINKDQMEETVDAIRKNGGQAES---FHLDVSDENSVKAFADQIKDACGTIDILFNNAG-VDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLENG-GSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPL 192
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: YF3H_SCHPO (Uncharacterized oxidoreductase C22A12.17c OS=Schizosaccharomyces pombe GN=SPAC22A12.17c PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.677e-16 Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 39 GESVCKDIGXXXXXANGCSYV--HCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASH--AYTSSKHGVVGLMKNAAVELGRFGIRVNCVSP-YVVATPLAKDFYK 521 GE K+I ANG CDVT KE+E+A + +DI+ N GI + +D EF ++VNL+GVF +A + + G GS+++TAS+ GV+ V AY +SK GV+ L+K+ AVE +F RVNCVSP Y + F+K Sbjct: 57 GEKAAKEIAQ----ANGVKTYTCKCDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGIC--TGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWRKFA-RVNCVSPGYTTSDMTGGKFHK 215
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: BDHA_RALEH (D-beta-hydroxybutyrate dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hbdH1 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.677e-16 Identity = 49/138 (35.51%), Postives = 73/138 (52.90%), Query Frame = 3 Query: 96 YVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509 Y D++K EIE+ + A S +G DI+ NNAGI A I D ++ ++++NL F T+ A MK G II+ AS G++ AY ++KHG+VG K A+E + G+ N + P V TPL + Sbjct: 57 YHGADMSKAAEIEDMMRYAQSDFGGADILVNNAGIQHVAA--IEDFPPERWDAIIAINLTSAFHTTRLALPGMKQKDWGRIINVASTHGLVASAQKSAYVAAKHGIVGFTKVTALETAQTGVTANAICPGWVLTPLVQ 192
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.803e-16 Identity = 55/175 (31.43%), Postives = 91/175 (52.00%), Query Frame = 3 Query: 9 VLIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQA----EFELVLSVNLVGVFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 V++AD+ G V K++G +V DVT EK++ A+ TA ++G+LD+ N AG K + + A +F+ V+++N VG F + +A +M + RG I++TASV G + AY++SK VVG+ A +L GIR+ ++P + TP+ Sbjct: 31 VILADLPSSKGNEVAKELGDKVV------FVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPM 199
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.803e-16 Identity = 59/138 (42.75%), Postives = 73/138 (52.90%), Query Frame = 3 Query: 105 CDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDE-AKHNILDNDQAEFELVLSVNLVGVFLGTKHAARV--MKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAK 509 CDV +I V AV +YG +DI+ NNAG A I D + V++ NL VFL TK M RG II+ AS G G V + Y++SKHGVVGL K +EL R GI VN V P V TP+A+ Sbjct: 73 CDVADPAQIRAYVAAAVQRYGTVDILVNNAGRSGGGATAEIADELWLD---VITTNLTSVFLMTKEVLNAGGMLAKKRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLELARTGITVNAVCPGFVETPMAE 207
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.272e-16 Identity = 50/166 (30.12%), Postives = 94/166 (56.63%), Query Frame = 3 Query: 6 RVLIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPL 503 +V+I D + G +V +++ G ++ CDVT+E+++ V+ + ++G+LD + NNAG + + Q F +L +NL+G + TK A ++ + RG++I+ +S+ G IG + Y ++K V + K A++ ++G+RVNC+SP + TPL Sbjct: 35 QVVICDKDEARGRAVERELP-------GTVFLLCDVTREEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWPEETSAQG-FRQLLELNLLGTYTLTKLALPHLRKS-RGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNIWTPL 191
BLAST of CX300068 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.192e-16 Identity = 50/173 (28.90%), Postives = 96/173 (55.49%), Query Frame = 3 Query: 6 RVLIADIKDDLGESVCKDIGXXXXXANGCSYVHCDVTKEKEIENAVNTAVSQYGKLDIMFNNAGIVDEAKHNILDNDQAEFELVLSVNLVGVFLGTKHAARVMKPAGRGSIISTASVCGVIGGVASHAYTSSKHGVVGLMKNAAVELGRFGIRVNCVSPYVVATPLAKDFYKL 524 RV+I D + G ++ +++ G ++ CDVT+E +++ V+ + ++G+LD + NNAG + + Q F +L +NL+G + TK A ++ + +G++I+ +S+ G IG + Y ++K V + K A++ +G+RVNC+SP + TPL ++ L Sbjct: 35 RVVICDKDESGGRALEQELP-------GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQG-FRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAAL 198 The following BLAST results are available for this feature:
BLAST of CX300068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300068 ID=CX300068; Name=CX300068; organism=Citrus clementina; type=EST; length=524bpback to top |