CX300069

Overview
NameCX300069
Unique NameCX300069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length400
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300069 vs. ExPASy Swiss-Prot
Match: UGT48_CAEEL (Putative UDP-glucuronosyltransferase ugt-48 OS=Caenorhabditis elegans GN=ugt-48 PE=1 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.627e-11
Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 1
Query:  121 ELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFVS-EVWNLGLD-MKDVCDRNVVEKMVNDLMV 399
            +L EG     L+V WVPQ  VLAH  +  F+TH+G+NS +ES  AGVP+I  P+  DQ  N R V  + W +  D  + + D + +E  + +++V
Sbjct:  342 DLAEGLSNV-LVVDWVPQTAVLAHPRLKAFITHAGYNSLMESAYAGVPVILIPFMFDQPRNGRSVERKGWGILRDRFQLIKDPDAIEGAIKEILV 435          
BLAST of CX300069 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.627e-11
Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = 1
Query:   43 GLVDSKQRFLWVIR--PDSVIGEGDAL----AELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFV 315
            GL+ ++  F+W  R  PD  +   +AL    AE +E   +  ++  WVPQ ++L H ++ GFL+H GW S +E +V GVP+I  P   +Q  N++ V
Sbjct:  283 GLLLTEVNFIWAFRLHPDEKMTIEEALPQGFAEEIERNNKGMIVQGWVPQAKILRHGSIGGFLSHCGWGSVVEGMVFGVPIIGVPMAYEQPSNAKVV 379          
The following BLAST results are available for this feature:
BLAST of CX300069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
UGT48_CAEEL9.627e-1138.95Putative UDP-glucuronosyltransferase ugt-48 OS=Cae... [more]
FLRT_CITMA9.627e-1136.08Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]

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Properties
Property NameValue
Genbank descriptionC07005G02SK SaltLeaf1 Citrus clementina cDNA clone C07005G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300069 ID=CX300069; Name=CX300069; organism=Citrus clementina; type=EST; length=400bp
ATTACACTGTTGAAAAGAGAACAGCTGATTGAGTTTTGGCACGGTCTTGT
AGACAGTAAGCAGCGGTTCTTGTGGGTCATTAGGCCAGATTCTGTGATTG
GCGAAGGTGACGCCCTGGCAGAGCTTGTGGAGGGCACGAAGGAGAGAGGT
CTTTTGGTTAGTTGGGTTCCACAGGAGGAGGTACTGGCTCACCAGGCTGT
GGCTGGATTCTTGACACACAGTGGCTGGAACTCAACCTTGGAGAGTATAG
TAGCCGGGGTGCCAATGATTTGCTGGCCTTACTTTGCTGATCAACAGATC
AATAGTAGGTTTGTGAGTGAAGTGTGGAATCTTGGATTGGATATGAAGGA
TGTGTGCGATAGAAATGTTGTTGAGAAAATGGTGAATGATCTGATGGTGG
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