CX300097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_ECOL6 (Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.130e-22 Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P A KYGIR IPT+L FKNGE Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGE 86
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_ECO57 (Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.130e-22 Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P A KYGIR IPT+L FKNGE Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGE 86
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STRAU (Thioredoxin (Fragment) OS=Streptomyces aureofaciens GN=trxA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 5.338e-22 Identity = 43/79 (54.43%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 VT++++++ V+ S+ PVLV F PWCGPC+M+AP ++E+A EY GKV K+NTD++P +A++YG+RSIPT L FK GE Sbjct: 6 VTNATFKSDVLESDKPVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTDENPQLASQYGVRSIPTRLMFKGGE 84
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO1_CORNE (Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.553e-21 Identity = 42/79 (53.16%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 V +S++++ V+ S PV+V+FWA WCGPC+MIAPA++E+A E AG+V K+N D++P +A ++G+RSIPT+L FK+GE Sbjct: 5 VDNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMFKDGE 83
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_THIRO (Thioredoxin (Fragment) OS=Thiocapsa roseopersicina GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.519e-21 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 VTD S+E+ V+ S PVLV++WA WCGPC+MIAP ++E+A EYAG++ KLN D++PN +YGIR IPT++ + E Sbjct: 8 VTDDSFEDEVLKSLEPVLVDYWADWCGPCKMIAPVLDEIAGEYAGRIKVAKLNIDENPNTPRRYGIRGIPTLMLSRQSE 86
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STRCO (Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=1 SV=4) HSP 1 Score: 100.523 bits (249), Expect = 4.519e-21 Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD S+E V+ ++ PVLV+FWA WCGPCR IAP++E +A EY K+ KLN D++P A KYG+ SIPT+ ++ GE ++I Sbjct: 8 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTI 91
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_PSEAE (Thioredoxin OS=Pseudomonas aeruginosa GN=trxA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.902e-21 Identity = 40/78 (51.28%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNG 483 VTD+S+E V+ ++ PVLV++WA WCGPC+MIAP ++E+A++Y GK+ KLN D++ + KYG+R IPT++ FK+G Sbjct: 8 VTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDG 85
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_CHLLT (Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA PE=1 SV=5) HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 253 TDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 TD +++ ++ S+ VLV+FWA WCGPC M+ P IE+LA +Y GK KLN D++PNIA +YGIRSIPT+L K G+ Sbjct: 8 TDKNFQTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGIRSIPTMLIIKGGK 85
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_CHRVI (Thioredoxin OS=Chromatium vinosum GN=trxA PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20 Identity = 42/79 (53.16%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 VTD S+E V S +PVLV++WA WCGPC+M AP +E+A EYAG+V K N D++PN +YG R IPT++ F+ GE Sbjct: 7 VTDDSFEEEVXKSPDPVLVDYWADWCGPCKMXAPVXDEIADEYAGRVKXAKXNXDENPNTPPRYGXRGIPTLMLFRGGE 85
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_THIFE (Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20 Identity = 43/79 (54.43%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 V+D S+E V+ S PVLV+FWA WCGPC+MIAP +EE+A EYA ++ K N D++PN +Y IR IPT+L FK G+ Sbjct: 8 VSDDSFETDVLKSSKPVLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFNIDENPNTPPQYAIRGIPTLLLFKAGK 86 The following BLAST results are available for this feature:
BLAST of CX300097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300097 ID=CX300097; Name=CX300097; organism=Citrus clementina; type=EST; length=502bpback to top |