CX300097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAS1 (Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 41/84 (48.81%), Postives = 61/84 (72.62%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTDS++++ + S N LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A K+ + SIPT++ FK+GE + + Sbjct: 6 VTDSNFDDNIQSGVN--LVDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_ALIAC (Thioredoxin OS=Alicyclobacillus acidocaldarius GN=trxA PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.607e-18 Identity = 39/78 (50.00%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNG 483 +TD++++ I + PVLV+FWA WCGPCRM+AP +EE A+ +A KV KLN D++P +++GI SIPT++ FK G Sbjct: 5 LTDANFQQ-AIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGG 81
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO2_CORNE (Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 1.607e-18 Identity = 40/78 (51.28%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 253 TDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 TD +++ V+ +E PVLV+FWA WC PC+ IAP +EEL+ EYAGKV K++ + A KY IR+IP +L FK+GE Sbjct: 9 TDENFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTAVKYNIRNIPALLMFKDGE 86
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAES (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.099e-18 Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTDS +++ + S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+GE + + Sbjct: 6 VTDSDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.099e-18 Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTDS +++ + S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+GE + + Sbjct: 6 VTDSDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAAW (Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAAU (Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAAS (Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAAR (Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAAN (Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87 The following BLAST results are available for this feature:
BLAST of CX300097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300097 ID=CX300097; Name=CX300097; organism=Citrus clementina; type=EST; length=502bpback to top |