CX300097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO2_SYNY3 (Thioredoxin-like protein slr1139 OS=Synechocystis sp. (strain PCC 6803) GN=slr1139 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14 Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 +TD+ +E PVLV FWA WCGPCR++APAI+ +AK+Y K+ KL D +P + + +P + FKN E Sbjct: 6 ITDAEFEQETQGQTKPVLVYFWASWCGPCRLMAPAIQAIAKDYGDKLKVLKLEVDPNPAAVAQCKVEGVPALRLFKNNE 84
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803) GN=slr0233 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.097e-14 Identity = 31/76 (40.79%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 259 SSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 +++ ++ S PVLV+F+A WCGPC+M+AP +E++ ++ K++TD P IAT+Y I+S+PT++ FK G+ Sbjct: 8 ANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQYQIQSLPTLVLFKQGQ 83
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIOM_MOUSE (Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.351e-14 Identity = 32/88 (36.36%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 223 REAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 R + V +++ V++SE PV+V+F A WCGPC+++ P +E++ + GKV K++ DD ++A +Y + ++PTVL KNG+ Sbjct: 56 RVCLTTFNVQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGD 143
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIOM_RAT (Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.988e-14 Identity = 30/74 (40.54%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 265 WENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 +++ V++SE PV+V+F A WCGPC+++ P +E++ + GKV K++ DD ++A +Y + ++PTVL KNG+ Sbjct: 70 FQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGD 143
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIOM_HUMAN (Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.988e-14 Identity = 30/74 (40.54%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 265 WENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 +++ V++SE PV+V+F A WCGPC+++ P +E++ + GKV K++ DD ++A +Y + ++PTVL KNG+ Sbjct: 70 FQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGD 143
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_TREPA (Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.127e-14 Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 292 NP-VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEK 489 NP V+V+FWAPWCG C+M+ P +EE+ E V KLN DD ++A ++ + SIPT++ FK+G++ Sbjct: 18 NPLVIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFKDGKE 84
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIOM_BOVIN (Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 9.127e-14 Identity = 30/74 (40.54%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 265 WENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 +++ V++SE PV+V+F A WCGPC+++ P +E++ + GKV K++ DD ++A +Y + ++PTVL KNG+ Sbjct: 70 FQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDIDDHTDLALEYEVSAVPTVLAMKNGD 143
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRXX_ARATH (Thioredoxin-X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13 Identity = 30/83 (36.14%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 241 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEK 489 ++ + +S + + V+ S PVLVEF A WCGPC++I PA+E L++EY K+ K++ D +P + ++ + +P + FK+G++ Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFKDGKE 153
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO2_CAEEL (Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 1 Query: 277 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEK 489 VI S PV+V+F A WCGPC+ + P +EE G V K+N D + +A YGI ++PTV FKNGEK Sbjct: 52 VIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKINVDHAGELAMDYGISAVPTVFAFKNGEK 122
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: TRX2_YEAST (Thioredoxin-2 OS=Saccharomyces cerevisiae GN=TRX2 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 2.656e-13 Identity = 32/82 (39.02%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 244 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEK 489 Q+ + S +++ + S + V+V+F+A WCGPC+MIAP IE+ A++Y+ A +KL+ D+ ++A K + S+PT++F+K G++ Sbjct: 4 QLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYS-DAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKGGKE 84 The following BLAST results are available for this feature:
BLAST of CX300097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300097 ID=CX300097; Name=CX300097; organism=Citrus clementina; type=EST; length=502bpback to top |