CX300104

Overview
NameCX300104
Unique NameCX300104
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BACC1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=metE PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.369e-47
Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ + D Y+ WAV SF +    V + TQ+HTHMCYSNF DI+ +I  +DADVI+IE SRS  + +   +    Y  GIG GVYDIHSPR+PS +E+   + + L V +
Sbjct:  558 GPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIDTLKH-TTYEKGIGLGVYDIHSPRVPSKDEMYKIVEQSLKVCD 720
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BACC0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus (strain AH820) GN=metE PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.369e-47
Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ + D Y+ WAV SF +    V + TQ+HTHMCYSNF DI+ +I  +DADVI+IE SRS  + +   +    Y  GIG GVYDIHSPR+PS +E+   + + L V +
Sbjct:  558 GPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIDTLKH-TTYEKGIGLGVYDIHSPRVPSKDEMYKIVEQSLQVCD 720
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BACAN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis GN=metE PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.369e-47
Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ + D Y+ WAV SF +    V + TQ+HTHMCYSNF DI+ +I  +DADVI+IE SRS  + +   +    Y  GIG GVYDIHSPR+PS +E+   + + L V +
Sbjct:  558 GPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIDTLKH-TTYEKGIGLGVYDIHSPRVPSKDEMYKIVEQSLQVCD 720
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BACAC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=metE PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.369e-47
Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ + D Y+ WAV SF +    V + TQ+HTHMCYSNF DI+ +I  +DADVI+IE SRS  + +   +    Y  GIG GVYDIHSPR+PS +E+   + + L V +
Sbjct:  558 GPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIDTLKH-TTYEKGIGLGVYDIHSPRVPSKDEMYKIVEQSLQVCD 720
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BACAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis (strain A0248) GN=metE PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.369e-47
Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVTILNWSFVRND PR E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ + D Y+ WAV SF +    V + TQ+HTHMCYSNF DI+ +I  +DADVI+IE SRS  + +   +    Y  GIG GVYDIHSPR+PS +E+   + + L V +
Sbjct:  558 GPVTILNWSFVRNDIPRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIDTLKH-TTYEKGIGLGVYDIHSPRVPSKDEMYKIVEQSLQVCD 720
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_STAES (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metE PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.318e-47
Identity = 99/164 (60.37%), Postives = 116/164 (70.73%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVTILNWSF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR    + YL+ AVHSF++    V D TQ+HTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++
Sbjct:  543 GPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLEDAVHSFKLATSSVHDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIQDF-EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQID 705
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.318e-47
Identity = 99/164 (60.37%), Postives = 116/164 (70.73%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVTILNWSF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR    + YL+ AVHSF++    V D TQ+HTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++
Sbjct:  543 GPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLEDAVHSFKLATSSVHDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIQDF-EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQID 705
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_METCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Methylococcus capsulatus GN=metE PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.318e-47
Identity = 94/164 (57.32%), Postives = 115/164 (70.12%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLE 502
            GPVT+L WSF R+DQPR  T  QIALAI+DEV DLE AG+  IQIDE A REGLPL+ +++  YL WAV +FR+ + GV D TQ+HTHMCYS F DI+ +I ++DADVITIE  RS   LL  F     Y   IGPGVYDIHSPR+P+  EI   + K  A ++
Sbjct:  555 GPVTMLQWSFARDDQPRAVTALQIALAIRDEVADLEAAGVAAIQIDEPAFREGLPLKAADRADYLDWAVKAFRLASCGVADDTQIHTHMCYSEFGDILPAIAELDADVITIETCRSAMDLLEAF-GAFGYPNDIGPGVYDIHSPRVPAGAEIRALLEKAAAAVD 717
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BURPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei GN=metE PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.318e-47
Identity = 95/152 (62.50%), Postives = 112/152 (73.68%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEI 466
            GPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E+  YL WAV +F I   GV D TQ+HTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI
Sbjct:  558 GPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEI 708
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BURP6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 668) GN=metE PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.318e-47
Identity = 95/152 (62.50%), Postives = 112/152 (73.68%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEI 466
            GPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E+  YL WAV +F I   GV D TQ+HTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI
Sbjct:  558 GPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEI 708
The following BLAST results are available for this feature:
BLAST of CX300104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
METE_BACC16.369e-4755.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACC06.369e-4755.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAN6.369e-4755.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAC6.369e-4755.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAA6.369e-4755.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAES8.318e-4760.375-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAEQ8.318e-4760.375-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_METCA8.318e-4757.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPS8.318e-4762.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP68.318e-4762.505-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC07006B05SK SaltLeaf1 Citrus clementina cDNA clone C07006B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300104 ID=CX300104; Name=CX300104; organism=Citrus clementina; type=EST; length=507bp
GCACGAGGCTGGCCCTGTCACCATTTTGAACTGGTCATTTGTTCGAAATG
ATCAGCCCAGATTCGAGACCTGCTATCAGATTGCATTGGCAATCAAGGAT
GAAGTTGAGGATCTTGAGAAAGCTGGTATCACTGTCATCCAGATTGATGA
GGCTGCTTTACGAGAGGGATTACCACTCAGGAAGTCTGAGCAGGACTTTT
ATCTGAAATGGGCTGTGCACTCCTTTAGGATTACTAACTGAGGTGTTCAA
GACACTACCCAGGTCCATACCCACATGTGCTATTCAAACTTCAACGATAT
CATCCACTCAATTATGGACATGGACGCAGATGTGATCACTATTGAGAACT
CTAGATCCGATGAAAAGCTTCTCTCAGTCTTCCGTGAGGGAGTGAAGTAT
CGCGCTGGCATTGGTCCCGGTGTGTACGACATCCACTCTCCGAGGATCCC
ATCGACAGAAGAAATTGCCGATCGCATCAACAAGATGCTTGCAGTTCTTG
AGAGCAA
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