CX300114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300114 vs. ExPASy Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.198e-22 Identity = 46/70 (65.71%), Postives = 59/70 (84.29%), Query Frame = 1 Query: 1 RMRVLRRLLRKYRESKNIDKHMYHDMYMKVMGNVFKNKLVLMERIHKSKAEKARQKTLSDQLEAKRANNK 210 RMR+LRRLLR+YRESK ID+HMYH +Y++ GNVFKNK +LME IHK KA++AR+K LSDQ EA+R+ + Sbjct: 98 RMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRSKTR 167
BLAST of CX300114 vs. ExPASy Swiss-Prot
Match: RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 9.305e-22 Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 1 Query: 1 RMRVLRRLLRKYRESKNIDKHMYHDMYMKVMGNVFKNKLVLMERIHKSKAEKARQKTLSDQLEAKR 198 R RVLRRLL+KYR+SK ID+H+YHD+YMK GNVFKNK VLME IHK KAEK R K L+DQ EA+R Sbjct: 98 RQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARR 163
BLAST of CX300114 vs. ExPASy Swiss-Prot
Match: RL19_DANRE (60S ribosomal protein L19 OS=Danio rerio GN=rpl19 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.305e-22 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 1 RMRVLRRLLRKYRESKNIDKHMYHDMYMKVMGNVFKNKLVLMERIHKSKAEKARQKTLSDQLEAKRANNK 210 RMR+LRRLLR+YRE+K ID+HMYH +Y++ GNVFKNK +LME IHK KA+KAR+K L+DQ EA+R + Sbjct: 98 RMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTKTR 167
BLAST of CX300114 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.630e-19 Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 1 RMRVLRRLLRKYRESKNIDKHMYHDMYMKVMGNVFKNKLVLMERIHKSKAEKARQKTLSDQLEAKRANNKA 213 R+RVLRRLL+KYRE+K IDKH Y ++Y+K GNVFKNK L+E I KSK EK R+K + DQ +A+R NK+ Sbjct: 98 RIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQAQARRNKNKS 168
BLAST of CX300114 vs. ExPASy Swiss-Prot
Match: RL19_CAEEL (60S ribosomal protein L19 OS=Caenorhabditis elegans GN=rpl-19 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.098e-17 Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 1 RMRVLRRLLRKYRESKNIDKHMYHDMYMKVMGNVFKNKLVLMERIHKSKAEKARQKTLSDQLEAKRANNKAS 216 RMRVLR LLR+YR++K +DKH+YH++Y++ GN FKNK L+E I K K E R K L+DQ +A+R NK S Sbjct: 98 RMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKNKES 169
BLAST of CX300114 vs. ExPASy Swiss-Prot
Match: RL19B_SCHPO (60S ribosomal protein L19-B OS=Schizosaccharomyces pombe GN=rpl19b PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.013e-17 Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 1 RMRVLRRLLRKYRESKNIDKHMYHDMYMKVMGNVFKNKLVLMERIHKSKAEKARQKTLSDQLEAKRANNKAS 216 R RVLRRLLRKYRES IDKH+YH +Y++ GN FK+K L+E I ++KAE R K + +Q +A+RA KA+ Sbjct: 98 RQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRARAKAA 169
BLAST of CX300114 vs. ExPASy Swiss-Prot
Match: RL19A_SCHPO (60S ribosomal protein L19-A OS=Schizosaccharomyces pombe GN=rpl19a PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 9.013e-17 Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 1 RMRVLRRLLRKYRESKNIDKHMYHDMYMKVMGNVFKNKLVLMERIHKSKAEKARQKTLSDQLEAKRANNKAS 216 R RVLRRLLRKYRES IDKH+YH +Y++ GN FK+K L+E I ++KAE R K + +Q +A+RA KA+ Sbjct: 98 RQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRARAKAA 169
BLAST of CX300114 vs. ExPASy Swiss-Prot
Match: RL19_YEAST (60S ribosomal protein L19 OS=Saccharomyces cerevisiae GN=RPL19A PE=1 SV=5) HSP 1 Score: 79.7221 bits (195), Expect = 4.946e-15 Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 1 Query: 1 RMRVLRRLLRKYRESKNIDKHMYHDMYMKVMGNVFKNKLVLMERIHKSKAEKARQKTLSDQLEAKRANNKAS 216 R+RVLRRLL KYR++ IDKH+YH +Y + GN FK+K L+E I ++KA+ R+K L+++ EA+R N+A+ Sbjct: 98 RLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAA 169 The following BLAST results are available for this feature:
BLAST of CX300114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300114 ID=CX300114; Name=CX300114; organism=Citrus clementina; type=EST; length=216bpback to top |