CX300136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_CAEEL (rRNA 2'-O-methyltransferase fibrillarin OS=Caenorhabditis elegans GN=fib-1 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 6.809e-65 Identity = 119/153 (77.78%), Postives = 134/153 (87.58%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 N IKPG ++LYLGAASGTTVSH SD+VGP G+VYAVEFSHRSGRDL+ +AKKR NV+PI+EDARHP KYRMLVGMVDVIFSDVAQPDQARI+ALNA FL+ GGH VISIKANCIDST EAVF EV KL++++FKP EQVTLEP+ERDH Sbjct: 185 NTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGVAKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVISIKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDH 337
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_SCHPO (rRNA 2'-O-methyltransferase fibrillarin OS=Schizosaccharomyces pombe GN=fib1 PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 6.373e-63 Identity = 116/153 (75.82%), Postives = 136/153 (88.89%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 NI+IKPG RVLYLGAA+GT+VSHV+D+VGP G+VYAVEFSHRSGRDL+NMAKKRTNVIPI+EDARH KYRMLVGMVDV+F+DVAQPDQARI+ALNA+ FLK G VIS+KA+CIDST A VF EVKK+Q+++ KP EQ+TLEP+ERDH Sbjct: 142 NIYIKPGARVLYLGAANGTSVSHVADVVGPEGLVYAVEFSHRSGRDLLNMAKKRTNVIPIVEDARHVQKYRMLVGMVDVVFADVAQPDQARIVALNAAAFLKNEGGVVISVKASCIDSTADAAVVFAREVKKMQEEKIKPQEQLTLEPYERDH 294
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_CANGA (rRNA 2'-O-methyltransferase fibrillarin OS=Candida glabrata GN=NOP1 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 2.050e-61 Identity = 114/152 (75.00%), Postives = 133/152 (87.50%), Query Frame = 2 Query: 5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 ++I PG +VLYLGAASGT+VSHVSD+VGP GVVYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRMLVGMVD +F+DVAQPDQARI+ALN+ FLK G VISIKANCIDSTV AE VF EV+KL++++ KP EQ+TLEP+ERDH Sbjct: 158 LFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLVGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREEKIKPLEQLTLEPYERDH 309
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_YEAST (rRNA 2'-O-methyltransferase fibrillarin OS=Saccharomyces cerevisiae GN=NOP1 PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 4.567e-61 Identity = 112/152 (73.68%), Postives = 133/152 (87.50%), Query Frame = 2 Query: 5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 ++I PG +VLYLGAASGT+VSHVSD+VGP GVVYAVEFSHR GR+L++MAKKR N+IPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ FLK G VISIKANCIDSTV AE VF EV+KL++++ KP EQ+TLEP+ERDH Sbjct: 162 LFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNIIPIIEDARHPQKYRMLIGMVDCVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLEPYERDH 313
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_TETTH (rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila GN=FIB PE=2 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 1.329e-60 Identity = 113/153 (73.86%), Postives = 131/153 (85.62%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 +I IKPG +VLYLG ASGTTVSHV+DIVGP GVVYAVEFSHRSGRDLVNMAKKRTNV+PII DAR P +YR LVGMVDV+F+DVAQPDQARI+ +N YFLK GGHF+ISIKA CIDST VF +EV+KL+++ KP +Q+TLEP+ERDH Sbjct: 133 DIHIKPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVVPIIGDARKPQEYRFLVGMVDVVFADVAQPDQARIMGMNCQYFLKNGGHFLISIKACCIDSTNEPAVVFAAEVQKLKEEGLKPEQQLTLEPYERDH 285
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_ASHGO (rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya gossypii GN=NOP1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.329e-60 Identity = 111/152 (73.03%), Postives = 133/152 (87.50%), Query Frame = 2 Query: 5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 ++I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ FLK G VISIKANCIDSTV AE VF EV+KL++++ KP EQ+TLEP+ERDH Sbjct: 163 LFIAPGKKVLYLGAASGTSVSHVADVVGPEGLVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREEKIKPLEQLTLEPYERDH 314
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_NEUCR (rRNA 2'-O-methyltransferase fibrillarin OS=Neurospora crassa GN=nop-1 PE=3 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 5.050e-60 Identity = 112/152 (73.68%), Postives = 132/152 (86.84%), Query Frame = 2 Query: 5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I++KPG +VLYLGAASGT+VSHV+DIVGP G VYAVEFSHRSGRDL+NMA +RTNVIPI+EDAR P YRML+ MVDVIF+DVAQPDQARI+ +NA FLK GG +ISIKA+CIDST P E VF SEV+KL++D+F P EQ+TLEP+ERDH Sbjct: 157 IYMKPGSKVLYLGAASGTSVSHVADIVGPTGSVYAVEFSHRSGRDLINMATRRTNVIPIVEDARKPMAYRMLLPMVDVIFADVAQPDQARIVGINAKLFLKQGGGLLISIKASCIDSTAPPEQVFASEVQKLREDKFFPKEQLTLEPYERDH 308
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_DEBHA (rRNA 2'-O-methyltransferase fibrillarin OS=Debaryomyces hansenii GN=NOP1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 8.614e-60 Identity = 110/150 (73.33%), Postives = 130/150 (86.67%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L+ MAKKR NVIPII+DARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ FLK G VISIKANCIDSTV AE VF EV+KL++++ KP EQ+TLEP+ERDH Sbjct: 166 IAPGKKVLYLGAASGTSVSHVADVVGPEGMVYAVEFSHRPGRELIGMAKKRPNVIPIIDDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNSHLFLKDQGTVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLEPYERDH 315
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_DICDI (rRNA 2'-O-methyltransferase fibrillarin OS=Dictyostelium discoideum GN=fbl PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 3.619e-58 Identity = 106/153 (69.28%), Postives = 132/153 (86.27%), Query Frame = 2 Query: 5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV-TLEPFERDH 460 I IKPG +VLY+GAASGTT+SHVSDIVGP GVVY +E SHR GRDL+ MAKKRTNVIPIIEDARHP KYRML+GMVDV+F+DVAQP+QA+I+A N++YFLK GHF+ISIKA+CIDST P E V Q+E+ KL++++ +P + TL+P+ER+H Sbjct: 167 IHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPIIEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNSAYFLKNEGHFIISIKASCIDSTAPTEVVVQNEITKLKKEKLRPQHLLKTLDPYERNH 319
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL3_ARATH (Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS=Arabidopsis thaliana GN=FIB3 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 3.619e-58 Identity = 111/153 (72.55%), Postives = 129/153 (84.31%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 NIWIKPGV+VLYLGA+SG TVSHVSDIVGP G VYAVE S G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV P+QA IL+LNASYFLK+GGHF+ISIKAN IDST+ AE V+Q EV+KLQ ++ +P E + L+ E H Sbjct: 128 NIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKH 280 The following BLAST results are available for this feature:
BLAST of CX300136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300136 ID=CX300136; Name=CX300136; organism=Citrus clementina; type=EST; length=462bpback to top |