CX300136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_ENCCU (rRNA 2'-O-methyltransferase fibrillarin OS=Encephalitozoon cuniculi GN=NOP1 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 1.796e-57 Identity = 107/153 (69.93%), Postives = 130/153 (84.97%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 NI ++PG +VLYLGA+SGTTVSHVSDIVG +GVVYAVEFS RSGRDL+NM+ KR N++PIIEDAR+P++YRMLV +VD IFSDV+QPDQ RI+ALNA YFLK GG +SIKANC++S VPAE VF EV L+++ +P EQVTLEPFE+DH Sbjct: 116 NIHMEPGSKVLYLGASSGTTVSHVSDIVGKDGVVYAVEFSERSGRDLINMSMKRPNIVPIIEDARYPSRYRMLVPIVDCIFSDVSQPDQTRIVALNAQYFLKEGGGVDVSIKANCVNSAVPAETVFADEVNILRKNSIRPKEQVTLEPFEKDH 268
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_LEIMA (rRNA 2'-O-methyltransferase fibrillarin OS=Leishmania major PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 4.001e-57 Identity = 109/153 (71.24%), Postives = 129/153 (84.31%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 +I + PG +VLYLG A+GTTVSHVSD+VGP G+VYAVEFSHR GRDLV M+K+R ++PI+EDAR+P KYRMLV MVD IF DVAQPDQARILALNA FL+ GGH+VISIKANCIDST+ A V SE+ KL++D+ KP EQV+LEPFERDH Sbjct: 131 SIHMGPGSKVLYLGGATGTTVSHVSDLVGPEGMVYAVEFSHRVGRDLVEMSKRRP-IVPIVEDARYPMKYRMLVPMVDCIFMDVAQPDQARILALNAQAFLQNGGHYVISIKANCIDSTLEAPVVIASELNKLKKDKLKPLEQVSLEPFERDH 282
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_GIALA (rRNA 2'-O-methyltransferase fibrillarin OS=Giardia lamblia PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 3.281e-51 Identity = 102/150 (68.00%), Postives = 119/150 (79.33%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IKPG +VLYLGAASGTTVSHVSDIVGP G VYAVEFS RSGRDL+ +AK RTNV PII DARHP KYRM+V VD IFSDVAQPDQARI+A NA Y+LKA G +ISIKA+ +DST+ EAVF E++ L++ FK EQ+ + F R+H Sbjct: 166 IKPGAKVLYLGAASGTTVSHVSDIVGPTGAVYAVEFSQRSGRDLLEVAKARTNVYPIIADARHPYKYRMIVPEVDCIFSDVAQPDQARIVAENARYYLKANGGMLISIKASSVDSTLKPEAVFAREIETLREHDFKCKEQLDIGEFHRNH 315
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_THESM (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=flpA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.185e-38 Identity = 82/153 (53.59%), Postives = 109/153 (71.24%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 N IKPG VLYLG ASGTT SHVSDI+G G ++ +EFS R R+LV + ++R N++PI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK+GG+ +ISIK+ ID T E VF+ EV+K + F+ E+++LEP+E+DH Sbjct: 67 NFPIKPGTTVLYLGIASGTTASHVSDIIGWEGKIFGIEFSPRVLRELVPLVEERRNIVPILGDATKPEEYRALVTKVDVIFEDVAQPTQAKILIDNAKAYLKSGGYGMISIKSRSIDVTKEPEEVFR-EVEKELSEYFEVVERISLEPYEKDH 218
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_PYRKO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus kodakaraensis GN=flpA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.581e-37 Identity = 84/153 (54.90%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 N IKPG VLYLG ASGTT SHVSDIVG G V+ VEFS R R+LV + ++R N++PI+ DA P YR LV VDVIF DVAQP QA+IL NA +LK+GG+ +IS+K+ ID T E VF+ EV+K F+ E+++LEP+E+DH Sbjct: 67 NFPIKPGSTVLYLGVASGTTASHVSDIVGWEGKVFGVEFSPRVLRELVPLVEERRNIVPILGDATKPEGYRALVPKVDVIFEDVAQPTQAKILIDNAKVYLKSGGYGMISVKSRSIDVTKEPEQVFK-EVEKELSTYFEVVERLSLEPYEKDH 218
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_THEON (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermococcus onnurineus (strain NA1) GN=flpA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.065e-37 Identity = 84/150 (56.00%), Postives = 106/150 (70.67%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IKPG VLYLG ASGTT SHVSDIVG G V+ VEFS R R+LV + ++R N++PI+ DA P YR LV VDVIF DVAQP QA+IL NA FLK+GG+ +IS+K+ ID T E VF+ EV+K F+ E+++LEP+E+DH Sbjct: 70 IKPGSTVLYLGVASGTTASHVSDIVGWEGKVFGVEFSPRVLRELVPIVEERRNIVPILGDATKPEGYRALVPKVDVIFEDVAQPTQAKILIDNAKVFLKSGGYGMISVKSRSIDVTKEPEQVFK-EVEKELATYFEVVERLSLEPYEKDH 218
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_PYRFU (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus furiosus GN=flpA PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.696e-37 Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 N IKPG VLYLG ASGTT SHVSDIVG G +Y +EFS R R+LV + ++R N+IPI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID T E VF+ EV++ + F+ E++ LEP+E+DH Sbjct: 68 NFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIYGIEFSPRVLRELVPIVEERRNIIPILGDATKPEEYRALVTKVDVIFEDVAQPTQAKILIDNAKAYLKRGGYGMIAVKSRSIDVTKEPEQVFK-EVERELSEYFEVIERLNLEPYEKDH 219
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_THEGJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=flpA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 3.522e-37 Identity = 83/153 (54.25%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 N IKPG VLYLG ASGTT SHVSDIVG G ++ VEFS R R+LV + ++R N++PI+ DA P YR LV VDVIF DVAQP QA+IL NA FLK+GG+ +IS+K+ ID T E VF+ EV++ F+ E+++LEP+E+DH Sbjct: 67 NFPIKPGSTVLYLGIASGTTASHVSDIVGWEGKIFGVEFSPRVLRELVPIVEERRNIVPILGDATKPEGYRALVPKVDVIFEDVAQPTQAKILIDNAKVFLKSGGYGMISVKSRSIDVTKEPEEVFK-EVERELASYFEVVERLSLEPYEKDH 218
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_PYRHO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus horikoshii GN=flpA PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 7.845e-37 Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 N IKPG VLYLG ASGTT SHVSDIVG G ++ +EFS R R+LV + ++R N++PI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID T E VF+ EV++ + F+ E++ LEP+E+DH Sbjct: 68 NFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFR-EVERELSEYFEVIERLNLEPYEKDH 219
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAB (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrococcus abyssi GN=flpA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.025e-36 Identity = 79/153 (51.63%), Postives = 106/153 (69.28%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 N IKPG VLYLG ASGTT SHVSD++G G ++ +EFS R R+LV + + R N++PI+ DA P +YR LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID T E VF+ EV+K + F+ E++ LEP+E+DH Sbjct: 68 NFPIKPGKSVLYLGIASGTTASHVSDVIGWEGKIFGIEFSPRVLRELVPIVEDRKNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKKGGYGMIAVKSRSIDVTKEPEQVFR-EVEKELSEYFEVIERLNLEPYEKDH 219 The following BLAST results are available for this feature:
BLAST of CX300136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300136 ID=CX300136; Name=CX300136; organism=Citrus clementina; type=EST; length=462bpback to top |