CX300136

Overview
NameCX300136
Unique NameCX300136
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length462
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_AERPE (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Aeropyrum pernix GN=flpA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.338e-36
Identity = 74/150 (49.33%), Postives = 103/150 (68.67%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            +K G R+LYLG ASGTT SH+SDI+GP G +Y VEF+ R  RDL+ + + R N+ PI+ DAR P KYR LV  VD +++DVAQP+QA I+  NA +FL+ GG+ +++IKA  ID T     V++ E+K L     +  + V L+PF+RDH
Sbjct:   75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDH 224          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAE (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum aerophilum GN=flpA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.748e-36
Identity = 80/152 (52.63%), Postives = 103/152 (67.76%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            IK G  +LYLGAASGTT SH+SDIVG NG++Y+VEFS R  R+ +   + + R NV+PI+ DAR P +Y   V  VDV++ DVAQP QA+ILA NA YFLK GGH ++ IKA  ID T PA   F+ E+  L++  F   E V LEP++  H
Sbjct:   76 IKEGTHILYLGAASGTTPSHISDIVGENGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVVYIDVAQPAQAKILADNADYFLKPGGHVMLVIKAMSIDVTAPATETFKQEINTLKERGFDILETVHLEPYDTAH 227          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULIY (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=flpA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.283e-36
Identity = 70/150 (46.67%), Postives = 105/150 (70.00%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I+ G +VLYLGAASGTT+SHVSDI+  NG  Y VEFS R  R+L+ +A++R N+ P++ DAR P  Y+ +V  VDV++ D+AQPDQ  I   NA +FLK  G+ ++ IKA  ID T   + ++++EV+KL+   F+  + + L+P+++DH
Sbjct:   74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDH 223          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULIN (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=flpA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.283e-36
Identity = 70/150 (46.67%), Postives = 105/150 (70.00%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I+ G +VLYLGAASGTT+SHVSDI+  NG  Y VEFS R  R+L+ +A++R N+ P++ DAR P  Y+ +V  VDV++ D+AQPDQ  I   NA +FLK  G+ ++ IKA  ID T   + ++++EV+KL+   F+  + + L+P+++DH
Sbjct:   74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDH 223          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULIM (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=flpA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.283e-36
Identity = 70/150 (46.67%), Postives = 105/150 (70.00%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I+ G +VLYLGAASGTT+SHVSDI+  NG  Y VEFS R  R+L+ +A++R N+ P++ DAR P  Y+ +V  VDV++ D+AQPDQ  I   NA +FLK  G+ ++ IKA  ID T   + ++++EV+KL+   F+  + + L+P+++DH
Sbjct:   74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDH 223          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULIL (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=flpA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.283e-36
Identity = 70/150 (46.67%), Postives = 105/150 (70.00%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I+ G +VLYLGAASGTT+SHVSDI+  NG  Y VEFS R  R+L+ +A++R N+ P++ DAR P  Y+ +V  VDV++ D+AQPDQ  I   NA +FLK  G+ ++ IKA  ID T   + ++++EV+KL+   F+  + + L+P+++DH
Sbjct:   74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDH 223          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULIK (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=flpA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.283e-36
Identity = 70/150 (46.67%), Postives = 105/150 (70.00%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I+ G +VLYLGAASGTT+SHVSDI+  NG  Y VEFS R  R+L+ +A++R N+ P++ DAR P  Y+ +V  VDV++ D+AQPDQ  I   NA +FLK  G+ ++ IKA  ID T   + ++++EV+KL+   F+  + + L+P+++DH
Sbjct:   74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDH 223          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULIA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus islandicus (strain M.16.27) GN=flpA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.283e-36
Identity = 70/150 (46.67%), Postives = 105/150 (70.00%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I+ G +VLYLGAASGTT+SHVSDI+  NG  Y VEFS R  R+L+ +A++R N+ P++ DAR P  Y+ +V  VDV++ D+AQPDQ  I   NA +FLK  G+ ++ IKA  ID T   + ++++EV+KL+   F+  + + L+P+++DH
Sbjct:   74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNARFFLKVNGYMLLVIKARSIDVTKDPKEIYKAEVEKLENSNFETIQIINLDPYDKDH 223          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METKA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanopyrus kandleri GN=flpA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.981e-36
Identity = 75/147 (51.02%), Postives = 103/147 (70.07%), Query Frame = 2
Query:   20 GVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            G +VLYLGAA+GTT SHVSDI+  +GV Y VEF+ R  ++L+ + +KR N+IPI+ DA  P  Y  LV  VDVI+ D+AQP QA ++A NA  FL+ GG+ +++IKA  ID T   E VF+ E +KL++  F+  E + LEP+ERDH
Sbjct:   77 GSKVLYLGAAAGTTPSHVSDIIKESGVEYCVEFASRMMQELIPVCEKRPNMIPILGDATKPHGYAPLVEQVDVIYQDIAQPKQAEVVADNAEAFLRPGGYVIVAIKARSIDVTKEPEEVFEDEERKLEERGFEVLEVIDLEPYERDH 223          
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULSO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus solfataricus GN=flpA PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.894e-36
Identity = 70/150 (46.67%), Postives = 104/150 (69.33%), Query Frame = 2
Query:   11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I+ G +VLYLGAASGTT+SHVSDI+  NG  Y VEFS R  R+L+ +A++R N+ P++ DAR P  Y+ +V  VDV++ D+AQPDQ  I   NA +FLK  G  ++ IKA  ID T   + ++++EV+KL+   F+  + + L+P+++DH
Sbjct:   74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDH 223          
The following BLAST results are available for this feature:
BLAST of CX300136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FLPA_AERPE1.338e-3649.33Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_PYRAE1.748e-3652.63Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_SULIY2.283e-3646.67Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_SULIN2.283e-3646.67Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_SULIM2.283e-3646.67Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_SULIL2.283e-3646.67Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_SULIK2.283e-3646.67Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_SULIA2.283e-3646.67Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METKA2.981e-3651.02Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_SULSO3.894e-3646.67Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]

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Properties
Property NameValue
Genbank descriptionC07006F04SK SaltLeaf1 Citrus clementina cDNA clone C07006F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300136 ID=CX300136; Name=CX300136; organism=Citrus clementina; type=EST; length=462bp
TAATATTTGGATTAAACCTGGTGTTAGGGTTCTATACCTTGGTGCTGCTT
CCGGCACAACTGTCTCACATGTTTCGGACATTGTTGGCCCTAATGGAGTA
GTTTATGCAGTGGAATTTTCTCATAGAAGTGGTAGAGACTTGGTCAATAT
GGCAAAGAAGAGAACCAATGTTATACCCATAATTGAAGATGCTAGACATC
CTGCCAAGTACCGTATGTTGGTCGGTATGGTAGATGTAATATTTTCTGAC
GTTGCCCAACCGGATCAGGCGAGGATTTTAGCCCTGAATGCATCATATTT
TCTCAAAGCTGGAGGTCATTTTGTTATTTCTATCAAGGCAAACTGCATAG
ATTCCACTGTTCCTGCTGAGGCAGTGTTCCAGAGTGAAGTTAAGAAGCTG
CAACAGGATCAGTTCAAACCCTTTGAGCAAGTGACACTCGAGCCCTTTGA
GCGAGACCACGC
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