CX300136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_STAMF (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=flpA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.296e-35 Identity = 72/150 (48.00%), Postives = 105/150 (70.00%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I+ G +LYLG A+GTT SH+SDIVGP G +++VEF+ R R+ V +A R N+ PI+ DAR P +YR LV MVD I++D+AQP+QA I+A NA YFLK G+ +++IKA ID T +++ E+ L++ F+ + V LEP+++DH Sbjct: 75 IREGHSILYLGVATGTTASHISDIVGPTGRIFSVEFAPRVMREFVLVADIRKNLYPILGDARKPKEYRHLVEMVDGIYADIAQPEQAAIVADNADYFLKDNGYLLLAIKARSIDVTKEPSEIYRREINTLKERGFEIIDVVHLEPYDKDH 224
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_PYRIL (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=flpA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 7.343e-35 Identity = 77/152 (50.66%), Postives = 103/152 (67.76%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I+ G +LYLGAASGTT SH+SDIVG G++Y+VEFS R R+ + + + R NV+PI+ DAR P +Y V VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID T PA F+ E+ L++ F+ E V LEP++ H Sbjct: 76 IQEGTHMLYLGAASGTTPSHISDIVGERGLIYSVEFSPRVFREFIEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGFEILETVHLEPYDTAH 227
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULTO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus tokodaii GN=flpA PE=3 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 1.253e-34 Identity = 73/150 (48.67%), Postives = 101/150 (67.33%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I G +VLYLGAASGTT SHVSDIV G VY VEFS R R+ + +A+ R N+ PI+ DAR P YR LV VDV++ D+AQPD+ I NA +FLK GG+ +++IKA ID T +++ EV KL+++ F + + L+P+++DH Sbjct: 74 IVKGTKVLYLGAASGTTPSHVSDIVELEGKVYGVEFSPRVVREFLLVAQHRPNLFPILADARFPQYYRTLVEDVDVLYVDIAQPDETDIAIYNAKFFLKNGGYMMMAIKARSIDVTKEPTEIYEMEVNKLKENNFDVIQVIQLDPYDKDH 223
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_PYRCJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=flpA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.253e-34 Identity = 77/152 (50.66%), Postives = 102/152 (67.11%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I+ G +LYLGAASGTT SH+SDIVG G++Y+VEFS R R+ + + + R NVIPI+ DAR P +Y + VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID T PA F+ E+ L++ F E V LEP++ H Sbjct: 76 IREGTHMLYLGAASGTTPSHISDIVGERGLIYSVEFSPRVFREFMEKLVDQGRRNVIPILGDARFPYQYAHYIKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGFDVLETVHLEPYDTAH 227
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METMA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina mazei GN=flpA PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.636e-34 Identity = 81/156 (51.92%), Postives = 103/156 (66.03%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT---LEPFERDH 460 +I +K +VLYLGAASGTTVSHVSDIV G VY+VEF+ RS RD + +A +R N+ PI+ DA P Y +V VDVIF DVAQP+QA I A NA FLK G+ ++SIKA ID+ + +F+ EVKKL+Q FE +T L P+ DH Sbjct: 64 DIPLKRNSKVLYLGAASGTTVSHVSDIVS-EGAVYSVEFAPRSMRDFIGLASRRKNIFPILADAGKPDSYAHIVEPVDVIFQDVAQPNQAEIAARNAVRFLKKDGYLLLSIKARSIDTAASPKEIFKEEVKKLEQAFEPGFEVLTARELMPYHEDH 218
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METBF (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=flpA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.636e-34 Identity = 82/156 (52.56%), Postives = 103/156 (66.03%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQ---DQFKPFEQVTLEPFERDH 460 NI + +VLYLGAASGTTVSHVSDIV G VYAVEF+ RS RDL+ +A +R N+ PI+ DA P Y LV VD+IF DVAQP+QA I A NA FLK G+ ++SIKA ID+ + VF++EVKKL+Q +F+ L P+ DH Sbjct: 64 NIPLTKNSKVLYLGAASGTTVSHVSDIVS-EGAVYAVEFAPRSMRDLIGLASRRKNIHPILADAGKPDSYSHLVEPVDLIFQDVAQPNQAEIAARNAVRFLKREGYLLLSIKARSIDTVAKPKEVFKAEVKKLEQAFEPRFEILNAKDLMPYHEDH 218
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAR (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=flpA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.790e-34 Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I+ G +LYLGAASGTT SH+SDIVG G++Y+VEFS R R+ + + + R NV+PI+ DAR P +Y + VDV++ DVAQP QA+ILA NA YFLK GG+ ++ IKA ID T PA F+ E+ L++ ++ E V LEP++ H Sbjct: 76 IREGTHMLYLGAASGTTPSHISDIVGEKGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYIKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGYEILETVHLEPYDTAH 227
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_THENV (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=flpA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.644e-34 Identity = 77/152 (50.66%), Postives = 102/152 (67.11%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I+ G +LYLGAASGTT SH+SDIVG G++Y+VEFS R R+ + + + R NV+PI+ DAR P +Y V VDV + DVAQP QA+ILA NA YFLK GG+ ++ IKA ID T PA F+ E+ L++ F+ E V LEP++ H Sbjct: 76 IQEGTHILYLGAASGTTPSHMSDIVGERGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVAYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGFEILETVHLEPYDTAH 227
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METVS (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=flpA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.385e-33 Identity = 74/150 (49.33%), Postives = 101/150 (67.33%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IK G +VLYLGA++GTT SHVSDI + +VYAVEF+ R R+ ++ +R N+IPI+ DA P +Y +VG VDVIF DVAQP+QA IL NA +FL G+ +ISIKA ID T + +F + K L + F +++ +EPFE+DH Sbjct: 72 IKKGTKVLYLGASAGTTPSHVSDI-SEDTIVYAVEFAPRIMREFIDSCNERINLIPILGDANRPFEYSNIVGKVDVIFEDVAQPNQAEILVKNAKWFLNKDGYAMISIKARSIDVTKNPKEIFLEQKKILIEGGFDIVDEINIEPFEKDH 220
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina acetivorans GN=flpA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.385e-33 Identity = 78/156 (50.00%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT---LEPFERDH 460 NI + +VLYLGAASGTTVSHVSDI G VY+VEF+ RS RD + +A +R N+ PI+ DA P Y +V VD+IF DVAQP+QA I A NA+ FL G+ ++SIKA ID+ + +F+ EVKKL+Q FE +T L P+ DH Sbjct: 64 NIPLSKDSKVLYLGAASGTTVSHVSDIAS-EGAVYSVEFASRSMRDFIRLASRRKNIFPILADAGKPDSYAHIVEPVDLIFQDVAQPNQAEIAARNAARFLNKNGYLLLSIKARSIDTAASPKEIFKEEVKKLEQAFEPGFEILTARDLMPYHEDH 218 The following BLAST results are available for this feature:
BLAST of CX300136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300136 ID=CX300136; Name=CX300136; organism=Citrus clementina; type=EST; length=462bpback to top |