CX300136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METVO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus voltae GN=flpA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.362e-33 Identity = 72/150 (48.00%), Postives = 102/150 (68.00%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IK G +VLYLGA++GTT SHV+D V + VYAVEF+ R R+ + + R N+ PI+ DA P +Y +V VDVIF DVAQP+QA IL NA +FLK GG+ +ISIKA +D T +F+++ + ++Q+ FK + + +EPFE+DH Sbjct: 70 IKKGSKVLYLGASAGTTPSHVAD-VAEDSPVYAVEFAPRIMREFIESCEGRKNLFPILGDANKPEEYANIVEKVDVIFEDVAQPNQAEILIKNAKWFLKKGGYGMISIKARSVDVTENPRVIFEAQKEIMEQNGFKIVDAINIEPFEKDH 218
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METM5 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=flpA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.085e-33 Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IK G +VLYLGA++GTT SHV+DI N +VYA+EF+ R R+ ++ +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D T +F + K L + F+ ++V +EPFE+DH Sbjct: 72 IKKGTKVLYLGASAGTTPSHVADIA-ENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNAKWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEVNIEPFEKDH 220
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METJA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanocaldococcus jannaschii GN=flpA PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 4.029e-33 Identity = 71/150 (47.33%), Postives = 104/150 (69.33%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IK ++LYLGA++GTT SHV+DI G+VYA+E++ R R+L++ +R N+IPI+ DA P +Y +V VDVI+ DVAQP+QA IL NA +FLK GG+ +I+IKA ID T + +F+ + + L+ FK ++V +EPFE+DH Sbjct: 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDH 220
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METMP (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis GN=flpA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 5.262e-33 Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IK G +VLYLGA++GTT SHV+DI N +VYA+EF+ R R+ ++ +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D T +F + K L + F+ ++V +EPFE+DH Sbjct: 72 IKKGEKVLYLGASAGTTPSHVADIA-ENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNAKWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEVNIEPFEKDH 220
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METM7 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=flpA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 5.262e-33 Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IK G +VLYLGA++GTT SHV+DI N +VYA+EF+ R R+ ++ +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D T +F + K L + F+ +++ +EPFE+DH Sbjct: 72 IKKGTKVLYLGASAGTTPSHVADIA-ENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNARWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEINIEPFEKDH 220
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METM6 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=flpA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.531e-32 Identity = 71/150 (47.33%), Postives = 99/150 (66.00%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IK G +VLYLGA++GTT SHV+DI +VYA+EF+ R R+ ++ +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D T +F + K L + F+ ++V +EPFE+DH Sbjct: 72 IKKGTKVLYLGASAGTTPSHVADIA-ETSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNAKWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEVNIEPFEKDH 220
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_SULAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus acidocaldarius GN=flpA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.000e-32 Identity = 69/150 (46.00%), Postives = 100/150 (66.67%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 I G ++LYLGAASGTT SH+SDIV G VY+VEFS R R+L+ +A+ R N+ PI+ DAR P Y+ LV VD+++ D+AQP++ I NA +FLK G+ +I+IK+ ID T ++ +E KKL+ F E + L+P+++DH Sbjct: 74 IVKGSKILYLGAASGTTPSHISDIVELQGKVYSVEFSPRVIRELLLVAQYRPNMFPILADARFPQYYKSLVENVDIVYVDIAQPNETEIAMYNARFFLKKNGYMMIAIKSRSIDVTKDPREIYNAEAKKLEDAGFDIREVLELDPYDKDH 223
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_META3 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=flpA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.612e-32 Identity = 72/150 (48.00%), Postives = 103/150 (68.67%), Query Frame = 2 Query: 11 IKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 IK G +VLYLG ++GTT SHV+DI N VY+VEF+ R R+ ++++K R N+IPI+ DA +P +Y +V VDVIF DVAQP QA IL NA +FLK GG+ +ISIKA +D + +F+ + + L + F+ ++V +EPFE+DH Sbjct: 73 IKKGSKVLYLGVSAGTTPSHVADIT-ENSPVYSVEFAPRIMREFLDVSKDRKNLIPILGDATNPVEYSNVVEEVDVIFEDVAQPKQAEILVNNAKWFLKEGGYGMISIKARSVDVLRNPKEIFEEQKQILIEGGFEIVDEVNIEPFEKDH 221
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_ARCFU (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Archaeoglobus fulgidus GN=flpA PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.693e-31 Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 2 Query: 26 RVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 RVLYLGAASGTTVSH++DIV G++YAVE+S + L+ + ++R N+IP++ DA P KY +V VD+I+ D+AQ +Q IL NA +FLK G VI +KA IDST E VF+S +K+++ D FK + +L P+ RDH Sbjct: 60 RVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMPYHRDH 202
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FLPA_METTH (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanobacterium thermoautotrophicum GN=flpA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.211e-31 Identity = 68/145 (46.90%), Postives = 94/145 (64.83%), Query Frame = 2 Query: 26 RVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460 RVLYLGA++GTT SH+SDIV +G VY +EFS R R+L+ + + R N+ P++EDA P Y +V D+++ DVAQPDQ R+ N FLK G+ +I IKA ID T +F+ EV KL+ F+ +QV L P+E+DH Sbjct: 72 RVLYLGASAGTTASHISDIV-TDGRVYCIEFSPRMMRELLGVCESRKNMAPLLEDASRPLSYLRMVEAADLVYCDVAQPDQTRLFIENMDCFLKRDGYGLIMIKARSIDVTRSPRKIFREEVGKLESSGFRIIDQVGLNPYEKDH 215 The following BLAST results are available for this feature:
BLAST of CX300136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300136 ID=CX300136; Name=CX300136; organism=Citrus clementina; type=EST; length=462bpback to top |