CX300138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.618e-17 Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGG-RFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTI-RGIKPNVAAGLPSQCGVRIPY--KISPSTDCS 299 ++ P+T A++CG+V ++L PC +L GG P P CC+GVR LNG TT DR+ AC C+K A + G+ + AAG+P +CG++IPY +I +T C+ Sbjct: 15 VIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 6.171e-17 Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 AI CG V + + PC+ +++ GG P CC GV++L+ AR+ DRQ+ACNCLK I + + A +P +CGV +PY IS + DCSRV Sbjct: 23 AIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.375e-16 Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 27 NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +AI+C V L PC+ +L +G PP CC GV+SL A T+ D++AAC C+K ++ +KP +A L S CG +P SP+ DC+ V Sbjct: 24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.000e-16 Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR--GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 AI+C V A+L PC+ ++ GG P CC+G+R L+ A + D+Q C C+K G + I AA LP +CGV++PYKI PST+C+ ++ Sbjct: 23 AISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.224e-16 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV---AAGLPSQCGVRIPYKISPSTDCSRVR 308 A++C V A L PC+ ++ GG P CC+G+ +L A+T+ DRQ C C+K A G + + P A LPS+CGV +PYK SPSTDC ++ Sbjct: 20 AVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLT-LSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.386e-15 Identity = 41/97 (42.27%), Postives = 53/97 (54.64%), Query Frame = 3 Query: 18 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVR-IPYKISPSTDCSRV 305 PV AI+C QV +++ PC +L P CC +R L+ + TPDRQA CNCLK G+K AA LP C V + ISP+ DCS+V Sbjct: 27 PVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLK-TQAKSYGVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.170e-13 Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 3 Query: 33 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 + CGQV +L+ C+PFL P CC+GV L A T D++ AC C+K A I+ + A+ LP +CGV I IS +T+C + Sbjct: 1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.807e-12 Identity = 32/99 (32.32%), Postives = 53/99 (53.54%), Query Frame = 3 Query: 15 APVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPY-KISPSTDCSRVR 308 AP CG+V + PC+ F++ + P CCSG + L+ +TT ++ AC C+ RA I GIK + A +P +C ++ I+ DCS+++ Sbjct: 27 APAPGEEACGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGISGIKNELVAEVPKKCDIKTTLPPITADFDCSKIQ 125
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.020e-11 Identity = 33/101 (32.67%), Postives = 53/101 (52.48%), Query Frame = 3 Query: 6 LVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPY-KISPSTDCSRV 305 L +AP CG+V + PC+ F++ + P CCSG + L+ +TT ++ AC C+ A I GIK + A +P +CG+ I+ DCS++ Sbjct: 24 LASAPAPGEGPCGKVVHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITADFDCSKI 124
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.874e-11 Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 3 Query: 36 TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISP---STDC 296 TCG V +L PC+PF++ + P CCSG + L+G +T P R AC C++ A T I + + +P CG+ + K+ P + DC Sbjct: 39 TCGTVVGALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGI-VDSKLPPIDVNMDC 127 The following BLAST results are available for this feature:
BLAST of CX300138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300138 ID=CX300138; Name=CX300138; organism=Citrus clementina; type=EST; length=546bpback to top |