CX300141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25 Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L+ P T AI+CGQV ++++PC+ + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+I G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 15 LLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25 Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L+ P T AI+CGQV ++++PC+ + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+I G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 16 LLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 56/103 (54.37%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 3 ILVTAPVTNA-ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP+ A ++CG VT LAPCIP+L TGG P CC+GV+ L AA TT DRQAACNCLK A G I + P AA LP +C V IPYKIS +T+C+ ++ Sbjct: 16 MVVIAPMAEAAVSCGTVTGDLAPCIPYL-TGGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.620e-25 Identity = 57/102 (55.88%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V AP A+TCGQVT++LAPC+P+L G P CC GV+ L G A+TT DRQAAC CLK A + + AA LPS C V IPYKISPSTDCS+V+ Sbjct: 15 MVVVAPHAEALTCGQVTSTLAPCLPYLMNRG--PLGGCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25 Identity = 51/102 (50.00%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 + + A V AI+CG V SLAPC +L GG PP CC+GV++LN A+TTPDRQ AC C++ +I G+ P++A+GLP +CGV IPY IS ST+C+ ++ Sbjct: 15 VCIVASVDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.050e-24 Identity = 57/102 (55.88%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 3 ILVTAPVTNA-ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 I+V AP A ITCG V++ LAPCI +L+ G CC G+++LN AA TTPDR+ ACNCLK A I+GI AAGLP CGV IPY ISPST+C+ V Sbjct: 17 IVVAAPYAEAGITCGMVSSKLAPCIGYLKGGPL--GGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24 Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 3 Query: 33 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +TCGQV +LA CI FL+ GG PP CC+GV+++ ++RTT DR+A C+CLK A G +RGI PN A LP +CGV IPYKIS ST+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24 Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 3 ILVTAP-VTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L+ AP AITCGQV +++ PC+ + R GG P CCSGVRSL AA TT DR+ ACNCLK A I+G+ AA +PS+CGV +PY IS S DCSRV Sbjct: 15 LLLAAPHAAVAITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24 Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 3 ILVTAP-VTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L+ AP AITCGQV +++ PC+ + R GG P CCSGVRSL AA TT DR+ ACNCLK A I+G+ AA +PS+CGV +PY IS S DCSRV Sbjct: 15 LLLAAPHAAVAITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24 Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115 The following BLAST results are available for this feature:
BLAST of CX300141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300141 ID=CX300141; Name=CX300141; organism=Citrus clementina; type=EST; length=546bpback to top |