CX300141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 A+TC VT +L PC+ +L+ G PPP CC+GVRSL AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20 Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 6 LVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +V + A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 21 VVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20 Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 6 LVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +V + A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DCS++ Sbjct: 21 VVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.329e-19 Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 I + +P + I CG VT++LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A I+G+ ++ A LP+ CGV IPY IS ST+C + Sbjct: 16 IYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.865e-19 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 3 ILVTAP-VTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 +L AP A+ CGQV + + PC+ +++ GG P CC+GVR L+ A+++ DRQ CNCLK I + N AA +PS+C V +PY ISP DCSR+ Sbjct: 16 MLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.048e-19 Identity = 40/92 (43.48%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 AITC VT +L PC+P+LR+GG+ P P CC+G + L GA RT DR+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C+ + Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18 Identity = 44/92 (47.83%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 AI C QV LA C+P+L+ GG P P CC+G+ SL AA DRQ ACNCLK TI GI + A LP++CGV I S + DC+ + Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18 Identity = 54/107 (50.47%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 +LVTAP+ + AI+CG VT SL C +L GG F P CCSGV+ LN ARTT DRQ AC C++ RA G+ + AA LP C VRI Y IS T+C+ VR Sbjct: 15 MLVTAPMASEAAISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.290e-18 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 3 Query: 3 ILVTAPVT-NAI-TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V P+T NA+ +CG V +LA CI +L G CC+GV +L A TTPDRQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C+ VR Sbjct: 15 MIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CX300141 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.770e-17 Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 33 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 + CGQV +SLA CIPFL G P CC+GV++L A T+ DR+AAC C+K A IK + A+ LP +CGV I IS +T+C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91 The following BLAST results are available for this feature:
BLAST of CX300141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300141 ID=CX300141; Name=CX300141; organism=Citrus clementina; type=EST; length=546bpback to top |