CX300146

Overview
NameCX300146
Unique NameCX300146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length419
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300146 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.062e-25
Identity = 52/75 (69.33%), Postives = 58/75 (77.33%), Query Frame = 1 
Query:    1 IEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLNNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELW 225
            +EDWV+IG PAK KV TE    PF DQCT  EKEAVNVSL NLLTYPFV+EG+ N TL L GG+YDFV+G FE W
Sbjct:  248 VEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322
The following BLAST results are available for this feature:
BLAST of CX300146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CAHC_HORVU4.062e-2569.33Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionC07006G02SK SaltLeaf1 Citrus clementina cDNA clone C07006G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300146 ID=CX300146; Name=CX300146; organism=Citrus clementina; type=EST; length=419bp
ATTGAAGACTGGGTGAAAATTGGCATCCCTGCCAAGTCTAAGGTGTTAAC
AGAGCATGGTGACAAGCCTTTTGGAGACCAATGCACATACTGTGAAAAGG
AGGCGGTGAATGTGTCCCTCAATAATCTGCTAACGTATCCATTTGTGAGA
GAAGGCTTGGTGAACAAAACTCTGGCACTCAAGGGTGGTTACTATGATTT
CGTTAATGGATCATTCGAGCTCTGGGGTCTGGACTTTAGCCTTTCTCCTC
CACTCTCCGTATGAACATCAACCGATATATGATATCAGAGACCTCATCTT
TGTTCTCTTTATTACCATGTGATCTACTTTTATCTCCCTTTCTTCCCATG
TGTACTCTTGTATGGTGTATTGAGCTGCAATTTACAATAGACTTACGATG
AAGAAAAAAAAAAAAAAAA
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