CX300147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_PROMA (10 kDa chaperonin OS=Prochlorococcus marinus GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.520e-20 Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 344 + +KPL DRVFIKV+E+EE TAGG+LL + +KEKP +G V VGPG +++G+R+ + G+ V+YSKYAG D K GSD Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_LEIXX (10 kDa chaperonin OS=Leifsonia xyli subsp. xyli GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.520e-20 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 +KPL DR+ IK EAE+TTA GL++ + +KEKP G V AVGPG +D+ GNR PL +A G+ V+YSKY G + K G +Y+ L A +V+AV+ Sbjct: 5 IKPLEDRIVIKQVEAEQTTASGLVIPDTAKEKPQEGVVEAVGPGRIDDNGNRVPLDVAVGDKVIYSKYGGTEVK-FGGQDYLVLSARDVLAVV 96
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_CYAA5 (10 kDa chaperonin OS=Cyanothece sp. (strain ATCC 51142) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.520e-20 Identity = 46/94 (48.94%), Postives = 68/94 (72.34%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 335 + +KPL DR+F+KV+ AEE TAGG+LL + ++EKP IG V+AVGPG +++G+R L + G+ V+YSKYAG D K S G +Y+ L +++A Sbjct: 8 VSTVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLS-GEDYVLLSEKDILA 100
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_SYNP6 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.985e-20 Identity = 46/98 (46.94%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 344 + + PL DRVF+KVAEAEE TAGG++L + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G+D +Y+ L +++AV++ Sbjct: 8 VSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGND--DYVLLSEKDILAVVA 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_SYNE7 (10 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groS PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.985e-20 Identity = 46/98 (46.94%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 344 + + PL DRVF+KVAEAEE TAGG++L + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G+D +Y+ L +++AV++ Sbjct: 8 VSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGND--DYVLLSEKDILAVVA 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BEUC1 (10 kDa chaperonin OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.985e-20 Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 +KPL DR+ +K EAE+TTA GL++ + +KEKP G V+A+GPG +D+ GNR P+ +A G+ V+YSKY G + K + G Y+ L A +V+AV+ Sbjct: 5 IKPLEDRIVVKTLEAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRVDDNGNRVPVDVAVGDVVIYSKYGGTEVKYA-GQEYLILSARDVLAVV 96
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_TRIEI (10 kDa chaperonin OS=Trichodesmium erythraeum (strain IMS101) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.592e-20 Identity = 43/100 (43.00%), Postives = 70/100 (70.00%), Query Frame = 3 Query: 45 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 T + +KPL +RVF+KV+E+EE TAGG+LL +++KEKP +G V++ GPG +++G R + + G+ V+YSKYAG D K G Y+ L +++A+++ Sbjct: 5 TLSVSTVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIK-LGGDEYVLLAEKDILAIVN 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_SYNPX (10 kDa chaperonin OS=Synechococcus sp. (strain WH8102) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.592e-20 Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 + +KPL DRVFIKV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K G ++ L +++A+++ Sbjct: 8 VSTVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIK-LGGDEFVLLTEKDILAIVN 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_PROMM (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9313) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.592e-20 Identity = 45/97 (46.39%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K S Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLST-DEYVLLSEKDILAVVN 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_PROM9 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9312) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.592e-20 Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 + +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of CX300147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300147 ID=CX300147; Name=CX300147; organism=Citrus clementina; type=EST; length=479bpback to top |