CX300147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_SYNY3 (10 kDa chaperonin OS=Synechocystis sp. (strain PCC 6803) GN=groS PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 5.775e-20 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 335 + +KPL DRVF+KV+ AEE TAGG+LL + +KEKP IG V+ VGPG +++G P+ + G+ V+YSKYAG D K G +Y+ L +++A Sbjct: 8 VSTVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIK-LGGDDYVLLTEKDILA 100
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_RHOSR (10 kDa chaperonin OS=Rhodococcus sp. (strain RHA1) GN=groS PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.775e-20 Identity = 45/95 (47.37%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVG G ++E+GNR P+ + G+TV+YSKY G + K + G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVVS 98
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_RHOOB (10 kDa chaperonin OS=Rhodococcus opacus (strain B4) GN=groS PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.775e-20 Identity = 45/95 (47.37%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVG G ++E+GNR P+ + G+TV+YSKY G + K + G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVVS 98
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_RHOE4 (10 kDa chaperonin OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=groS PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.775e-20 Identity = 45/95 (47.37%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVG G ++E+GNR P+ + G+TV+YSKY G + K + G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVVS 98
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 5.775e-20 Identity = 44/96 (45.83%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 + +KPL DRVF+KV+ +EE TAGG+LL + +KEKP IG ++ VGPG +++G+R + G+ V+YSKYAG D K G +Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIK-LGGEDYVLLSEKDILAVV 102
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_MICLC (10 kDa chaperonin OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.543e-20 Identity = 45/94 (47.87%), Postives = 66/94 (70.21%), Query Frame = 3 Query: 63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 +KPL DR+ ++ EAE+TTA GL++ + +KEKP G V+AVGPG + E GNR P+ +A G+ V+YSKY G + K G Y+ L A +V+AV++ Sbjct: 5 IKPLEDRIVVRPLEAEQTTASGLVIPDTAKEKPQEGQVVAVGPGRVAENGNRVPVDVAEGDVVLYSKYGGTEVK-VGGEEYLVLSARDVLAVVT 97
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.543e-20 Identity = 44/95 (46.32%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+AVGPG ++G P+++ G+TV+++KYAG + K DG ++ +R +++AV++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVK-LDGVEHLVMREDDILAVIT 95
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.543e-20 Identity = 44/95 (46.32%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+AVGPG ++G P+++ G+TV+++KYAG + K DG ++ +R +++AV++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVK-LDGVEHLVMREDDILAVIT 95
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_ARTAT (10 kDa chaperonin OS=Arthrobacter aurescens (strain TC1) GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.543e-20 Identity = 42/93 (45.16%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 +KPL DR+ ++ EAE+TTA GL++ ++++EKP G V+A+GPG D+ GNR P+ +A G+ V+YSKY G + K + G Y+ L A +V+A++ Sbjct: 5 IKPLEDRIVVRPLEAEQTTASGLVIPDSAQEKPQEGEVVAIGPGRFDDNGNRVPVDVAVGDVVIYSKYGGTEVK-TGGNEYLVLSARDVLAIV 96
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.680e-19 Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 45 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVL 341 T + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K GSD Y+ L +++A++ Sbjct: 5 TLNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSD--EYVLLAERDILAIV 102 The following BLAST results are available for this feature:
BLAST of CX300147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300147 ID=CX300147; Name=CX300147; organism=Citrus clementina; type=EST; length=479bpback to top |