CX300147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_LISW6 (10 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.680e-19 Identity = 44/92 (47.83%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 338 LKPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + E G ++PL +A G+TV+++KY+G + +GT+Y+ LR S+++A+ Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.680e-19 Identity = 43/94 (45.74%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG + E+G +++ G+TV++SKYAG + K DG ++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIK-LDGVEHLVMREDDILAII 94
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_CYAP4 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.680e-19 Identity = 43/98 (43.88%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 344 + +KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G++ Y+ L +++A+++ Sbjct: 8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTE--EYVLLSEKDILAIVA 103
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH101_RHOBA (10 kDa chaperonin 1 OS=Rhodopirellula baltica GN=groS1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.680e-19 Identity = 46/92 (50.00%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 335 +L+PL+DRV ++ +EAEETTAGG++L +++KEKP GTV+AVGPG L + GNR LS++ G+ V+Y KY G++ + DG LR S+++A Sbjct: 8 NLRPLDDRVVVQPSEAEETTAGGIVLPDSAKEKPQRGTVVAVGPGKLLDSGNRGELSVSVGDVVIYGKYGGSEIE-VDGHEMKILRESDILA 98
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 44/97 (45.36%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 54 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVL 341 + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K GSD Y+ L +++A++ Sbjct: 8 VSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSD--EYVLLAERDILAIV 102
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_MYCVP (10 kDa chaperonin OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL ++ G+ V+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_MYCPA (10 kDa chaperonin OS=Mycobacterium paratuberculosis GN=groS PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_MYCGI (10 kDa chaperonin OS=Mycobacterium gilvum (strain PYR-GCK) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL ++ G+ V+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_MYCAV (10 kDa chaperonin OS=Mycobacterium avium GN=groS PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_MYCA1 (10 kDa chaperonin OS=Mycobacterium avium (strain 104) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 344 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99 The following BLAST results are available for this feature:
BLAST of CX300147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300147 ID=CX300147; Name=CX300147; organism=Citrus clementina; type=EST; length=479bpback to top |