CX300147

Overview
NameCX300147
Unique NameCX300147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length479
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BACC3 (10 kDa chaperonin OS=Bacillus cereus (strain 03BB102) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BACC1 (10 kDa chaperonin OS=Bacillus cereus (strain ATCC 10987) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BACC0 (10 kDa chaperonin OS=Bacillus cereus (strain AH820) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BACAN (10 kDa chaperonin OS=Bacillus anthracis GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BACAC (10 kDa chaperonin OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BACAA (10 kDa chaperonin OS=Bacillus anthracis (strain A0248) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_PROAC (10 kDa chaperonin OS=Propionibacterium acnes GN=groS PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19
Identity = 42/93 (45.16%), Postives = 65/93 (69.89%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            +KPL DRV ++  EAE+TTA GL++ + +KEKP  G VI+ GPG +D++G R P+ +  G+ V++SKY G + K  DG  Y+ L A +++AV+
Sbjct:    5 IKPLEDRVLVQPLEAEQTTASGLVIPDTAKEKPQEGKVISAGPGRVDDKGTRVPMDVKEGDVVIFSKYGGTEVK-YDGQEYLLLNARDILAVV 96          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_COREF (10 kDa chaperonin OS=Corynebacterium efficiens GN=groS PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19
Identity = 42/94 (44.68%), Postives = 66/94 (70.21%), Query Frame = 3
Query:   60 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            ++KPL D++ +++ EAE TTA GL++ +++KEKP   TVIAVGPG  DE+G R PL I   + V++S+Y G + K  DG  Y+ L A +++A++
Sbjct:    5 NIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDEKGERIPLDIKEDDVVIFSRYGGTEIK-FDGVEYLLLSARDILAIV 97          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BACCR (10 kDa chaperonin OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=groS PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19
Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of CX300147 vs. ExPASy Swiss-Prot
Match: CH10_BACC4 (10 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groS PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19
Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   63 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 341
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
The following BLAST results are available for this feature:
BLAST of CX300147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_BACC36.385e-1949.4610 kDa chaperonin OS=Bacillus cereus (strain 03BB1... [more]
CH10_BACC16.385e-1949.4610 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH10_BACC06.385e-1949.4610 kDa chaperonin OS=Bacillus cereus (strain AH820... [more]
CH10_BACAN6.385e-1949.4610 kDa chaperonin OS=Bacillus anthracis GN=groS PE... [more]
CH10_BACAC6.385e-1949.4610 kDa chaperonin OS=Bacillus anthracis (strain CD... [more]
CH10_BACAA6.385e-1949.4610 kDa chaperonin OS=Bacillus anthracis (strain A0... [more]
CH10_PROAC8.339e-1945.1610 kDa chaperonin OS=Propionibacterium acnes GN=gr... [more]
CH10_COREF8.339e-1944.6810 kDa chaperonin OS=Corynebacterium efficiens GN=... [more]
CH10_BACCR8.339e-1948.3910 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH10_BACC48.339e-1948.3910 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]

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Properties
Property NameValue
Genbank descriptionC07006G03SK SaltLeaf1 Citrus clementina cDNA clone C07006G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300147 ID=CX300147; Name=CX300147; organism=Citrus clementina; type=EST; length=479bp
ATCATCTCATAGTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGAT
GAAATCAAGGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGC
TGAGGCTGAGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCA
AGGAGAAACCTTCCATTGGAACGGTCATTGCTGTTGGACCCGGTCCTCTA
GATGAGGAAGGTAATAGGAAACCTCTATCCATTGCACCAGGGAACACGGT
GATGTATTCGAAGTATGCAGGGAATGACTTCAAGGGCAGTGATGGCACCA
ACTACATTGCTTTAAGAGCTTCTGAAGTGATGGCTGTGCTCTCTTAGTTG
TCTGTGTTTACTTGAGCGAGGCTTTATATGTATTAGTGAATTGAATTTTA
TGGTTGAGTTGCCTCAAGGCATACGGATTTTGACTGTAATCTTATTTGAA
CATAAAGAATTGCAGCTTGATCAATCGAA
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