CX300163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_SHIBS (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 4 (strain Sb227) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_SHIB3 (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 52/158 (32.91%), Postives = 69/158 (43.67%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP---PLKNLEGLLSTKVSSDTG-----------SNFEADAN----------ETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLDYSPATISA 402 K R ++RA+ G LV T D P G R D + M P P + L+ + + + G S + A D S+SWKDLEW+R P++IKGIL +DA A GI+VSNHG RQLD +T A Sbjct: 132 KDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRILQAMTKPDWALNVGLLGRPHDLGNISRYLGKATTLEDYVGWLANNFDPSISWKDLEWIREFWQGPMIIKGILDPQDARDALSFGADGIVVSNHGGRQLDGVLSTAKA 289
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSM (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281
BLAST of CX300163 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLU (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.806e-12 Identity = 49/150 (32.67%), Postives = 66/150 (44.00%), Query Frame = 1 Query: 1 KKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAAERREAGIIVSNHGARQLD 378 + R ++RA+ G LV T D P G R D + M P + L+ + + + D G N + D S+SWKDLEW+R + P++IKGIL EDA A GI+VSNHG RQLD Sbjct: 132 RDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281 The following BLAST results are available for this feature:
BLAST of CX300163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300163 ID=CX300163; Name=CX300163; organism=Citrus clementina; type=EST; length=403bpback to top |