CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYIL 351 GKTEL+KALA ++F E A+VRIDMSEYMEKH++ RLIGAPPGYVGY+E GQLTE VRRRPY V+L DEI+KAH+DVFNV+L LDDGR+TDSQG T F N VIIMTSN+GS IL Sbjct: 617 GKTELAKALASFLFDDENAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQVLDDGRITDSQGRTIDFKNAVIIMTSNIGSDAIL 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_DEIRA (Chaperone protein clpB OS=Deinococcus radiodurans GN=clpB PE=3 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 86/119 (72.27%), Postives = 100/119 (84.03%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL+KALA ++F + +A+VRIDMSEYMEKH + RLIGAPPGYVG+EE GQLTE VRRRPY VIL DEI+KAH DVFNV+L LDDGR+TD QG T F NT+IIMTSN+GS IL+M Sbjct: 600 GKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAPPGYVGFEEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIGSPLILEM 718
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BACC1 (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 10987) GN=clpB PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 85/118 (72.03%), Postives = 100/118 (84.75%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K LA +F +EE ++RIDMSEYMEKHA+ RLIGAPPGYVGYEE GQLTE VRR+PY VIL DEI+KAH +VFN++L LDDGR+TDSQG T F NTVIIMTSN+GS ++LD Sbjct: 616 GKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHLLD 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BACAN (Chaperone protein clpB OS=Bacillus anthracis GN=clpB PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 85/118 (72.03%), Postives = 100/118 (84.75%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K LA +F +EE ++RIDMSEYMEKHA+ RLIGAPPGYVGYEE GQLTE VRR+PY VIL DEI+KAH +VFN++L LDDGR+TDSQG T F NTVIIMTSN+GS ++LD Sbjct: 616 GKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHLLD 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_LISMF (Chaperone protein clpB OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpB PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.532e-43 Identity = 83/122 (68.03%), Postives = 101/122 (82.79%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL+KALAF MF +E+ ++RIDMSEYMEKH++ RL+GAPPGYVGYEE GQLTE VRR PY ++L DEI+KAH DVFN++L LDDGR+TDSQG F NTVIIMTSN+GS +L+ +E Sbjct: 616 GKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEE 737
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 2.532e-43 Identity = 84/118 (71.19%), Postives = 101/118 (85.59%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+KALA +F +EE +VRIDMSEYMEKH++ RL+GAPPGYVGY+E GQLTE VRR PY +IL DEI+KAH DVFN++L LDDGR+TDS+G+ F NTV+IMTSNVGSQY+LD Sbjct: 613 GKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRNPYTIILLDEIEKAHPDVFNILLQVLDDGRLTDSKGVLVDFKNTVLIMTSNVGSQYLLD 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_LACLA (Chaperone protein clpB OS=Lactococcus lactis subsp. lactis GN=clpB PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.532e-43 Identity = 84/118 (71.19%), Postives = 101/118 (85.59%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+KALA +F +EE +VRIDMSEYMEKH++ RL+GAPPGYVGY+E GQLTE VRR PY +IL DEI+KAH DVFN++L LDDGR+TDS+G+ F NTV+IMTSNVGSQY+LD Sbjct: 613 GKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRNPYTIILLDEIEKAHPDVFNILLQVLDDGRLTDSKGVLVDFKNTVLIMTSNVGSQYLLD 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BACCR (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpB PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.532e-43 Identity = 84/118 (71.19%), Postives = 100/118 (84.75%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K LA +F +EE ++RIDMSEYMEKHA+ RLIGAPPGYVGYEE GQLTE VRR+PY V+L DEI+KAH +VFN++L LDDGR+TDSQG T F NTVIIMTSN+GS ++LD Sbjct: 616 GKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHLLD 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_LISMO (Chaperone protein clpB OS=Listeria monocytogenes GN=clpB PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.308e-43 Identity = 82/122 (67.21%), Postives = 101/122 (82.79%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL+KALAF MF +E+ ++RIDMSEYMEKH++ RL+GAPPGY+GYEE GQLTE VRR PY ++L DEI+KAH DVFN++L LDDGR+TDSQG F NTVIIMTSN+GS +L+ +E Sbjct: 616 GKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEE 737
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_TREDE (Chaperone protein clpB OS=Treponema denticola GN=clpB PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.320e-43 Identity = 85/121 (70.25%), Postives = 98/121 (80.99%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDD 363 GKTEL++ LA ++F E+AL RIDMSEYMEKH++ RLIGAPPGYVGY+E GQLTE VRRRPY VIL DEI+KAH DVFNV L LDDGR+TD QG F NT+IIMTSN+GS+YIL D Sbjct: 614 GKTELARTLADFLFNDEKALTRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHQDVFNVFLQILDDGRLTDGQGRVVDFKNTIIIMTSNIGSEYILTAKD 734 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |