CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.959e-40 Identity = 77/116 (66.38%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GK+EL+KALA Y F +EEA++R+DMSE+ME+H + +LIG+PPGYVGY E GQLTE VRRRPY V+L DEI+KAH DVFN++L L+DGR+TDS+G T F NT++IMTSNVGS I Sbjct: 648 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 763
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PARUW (Chaperone protein clpB OS=Protochlamydia amoebophila (strain UWE25) GN=clpB PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.959e-40 Identity = 75/118 (63.56%), Postives = 96/118 (81.36%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+KALAF +F +EAL+R+DMSEYMEKH + +LIG+PPGY+GYEE GQLTE +RRRPY V+L DEI+KAH DVFN++L DDGR+TDS+G + N + IMTSN+GS +L+ Sbjct: 611 GKTELAKALAFQLFNQDEALIRLDMSEYMEKHTVSKLIGSPPGYIGYEEGGQLTEALRRRPYAVVLFDEIEKAHPDVFNILLQVFDDGRLTDSKGRVVNCKNALFIMTSNIGSDLLLE 728
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_HELHP (Chaperone protein clpB OS=Helicobacter hepaticus GN=clpB PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.959e-40 Identity = 73/122 (59.84%), Postives = 101/122 (82.79%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKT+ +K LA ++F ++LVRIDMSEYMEKHA+ RL+GAPPGYVGYEE G LTE +RR+PY ++L DE++KAH DVFN++L LDDGR+TDS+G++ F+NT+II+TSN+ S I+++ D+ Sbjct: 612 GKTQCAKTLAEFLFDNAKSLVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGVLTEAIRRKPYSIVLFDEVEKAHPDVFNILLQVLDDGRLTDSKGVSVDFSNTIIILTSNIASDKIMEIGDK 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.959e-40 Identity = 77/116 (66.38%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GK+EL+KALA Y F +EEA++R+DMSE+ME+H + +LIG+PPGYVGY E GQLTE VRRRPY V+L DEI+KAH DVFN++L L+DGR+TDS+G T F NT++IMTSNVGS I Sbjct: 648 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 763
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: HS101_ARATH (Heat shock protein 101 OS=Arabidopsis thaliana GN=HSP101 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 80/117 (68.38%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYIL 351 GKTEL+KALA +F E LVRIDMSEYME+H++ RLIGAPPGYVG+EE GQLTE VRRRPY VIL DE++KAH VFN +L LDDGR+TD QG T F N+VIIMTSN+G++++L Sbjct: 611 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGAEHLL 727
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL++ALA MF E+A++R+DMSE+MEKHA+ RL+GAPPGYVG++E GQLTE VRR+PY VIL DEI+KAH DVFN++L LDDG +TD++G F NTVIIMTSNVG+Q + D Sbjct: 550 GKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD 667
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 77/118 (65.25%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL++ALA MF ++A++R+DMSE+MEKHA+ RL+GAPPGYVG+++ GQLTE VRR+PY VIL DEI+KAH DVFN++L LDDG +TD++G T F NTVIIMTSNVG+Q + D Sbjct: 550 GKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD 667
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 77/118 (65.25%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL++ALA MF ++A++R+DMSE+MEKHA+ RL+GAPPGYVG+++ GQLTE VRR+PY VIL DEI+KAH DVFN++L LDDG +TD++G T F NTVIIMTSNVG+Q + D Sbjct: 550 GKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD 667
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PROMA (Chaperone protein clpB OS=Prochlorococcus marinus GN=clpB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 78/122 (63.93%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTELSK+LA +F +E+A++RIDMSEYMEKH+I RLIGAPPGYVGYE GQL+E VRR PY VIL DE++KA+SDV N++L LD+GR+TD +G +F NT+II+TSNVGS+ I++M ++ Sbjct: 617 GKTELSKSLAKELFDSEKAMIRIDMSEYMEKHSISRLIGAPPGYVGYESGGQLSEAVRRNPYSVILFDEVEKANSDVLNIMLQILDEGRLTDGKGKNINFKNTIIILTSNVGSESIIEMTNK 738
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 77/120 (64.17%), Postives = 101/120 (84.17%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMD 360 GKTEL+KALA ++F E+A+VRIDMSEYMEK ++ RLIGA PGYVGYE+ GQLTE VRRRPY V+L DE++KA+ ++F+V+L LDDGR+TD QG T F NT++IMTSN+GSQ++++ D Sbjct: 621 GKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNED 740 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |