CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_FUSNN (Chaperone protein clpB OS=Fusobacterium nucleatum subsp. nucleatum GN=clpB PE=3 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 2.898e-39 Identity = 78/118 (66.10%), Postives = 96/118 (81.36%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKT L+K LA+ +F +E+ +VRIDMSEYM+K ++ RLIGAPPGYVGYEE GQLTE +R +PY VIL DEI+KAH DVFNV+L LDDGR+TD QG F NT+IIMTSN+GS +IL+ Sbjct: 611 GKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNTLIIMTSNIGSHFILE 728
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_LACPL (Chaperone protein clpB OS=Lactobacillus plantarum GN=clpB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 4.942e-39 Identity = 78/123 (63.41%), Postives = 99/123 (80.49%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYIL-DMDDE 366 GKTEL+KALA +F ++ +VRIDMSEYMEK ++ RL+GA PGYVGYEE GQLTE VRR PY ++L DEI+KAH DVFN++L LDDGR+TD QG T F NT++IMTSN+GS+ +L +DD+ Sbjct: 612 GKTELAKALAENLFDADDHMVRIDMSEYMEKESVSRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTILIMTSNLGSELLLAGVDDQ 734
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 4.942e-39 Identity = 75/113 (66.37%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL+KALA +MF + A+VRIDMSEY EKHA+ RL+GAPPGYVGY++ GQLTE VRRRPY V+L DE++KAH DVF+++L LD+GR+TD QG T F NTV+I+TSN+G+ Sbjct: 611 GKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSNLGA 723
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLP_TRYBB (Heat shock protein 100 OS=Trypanosoma brucei brucei GN=HSP100 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 6.455e-39 Identity = 74/121 (61.16%), Postives = 103/121 (85.12%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDD 363 GKTEL KA+A +F E+ +VRIDMSEYME+H++ RLIGAPPGY+G++E GQLTE VRRRP+ V+L DE++KAH +V+NV+L LDDGR+TDS+G T F+NT+I+MTSN+GS+++L+ ++ Sbjct: 608 GKTELVKAVAAELFDDEKHMVRIDMSEYMEQHSVSRLIGAPPGYIGHDEGGQLTEPVRRRPHAVVLFDEVEKAHPNVYNVLLQVLDDGRLTDSRGRTVDFSNTIIVMTSNLGSEHLLNPEE 728
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.431e-39 Identity = 76/118 (64.41%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL++ALA MF ++A++R+DMSE+MEKHA+ RL+GAPPGYVG+++ GQLTE VRR+PY VIL DEI+KAH DVFN++L LDDG +TD++G F NTVIIMTSNVG+Q + D Sbjct: 550 GKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD 667
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.101e-38 Identity = 75/113 (66.37%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL+KALA ++F + A+VRIDMSEY EKH++ RL+GAPPGY+GY++ GQLTE VRRRPY VIL DEI+KAH DVF+V+L LD+GR+TD QG T F NT++I+TSN+GS Sbjct: 612 GKTELAKALADFLFDDKRAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTSNLGS 724
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 1.101e-38 Identity = 76/116 (65.52%), Postives = 95/116 (81.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL + LA ++F +EE +VRIDMSE+MEKH++ RLIGAPPGYVGY++ G LTE VRR+PY V+L DE++KAHSDVFN +L LD+GR+TD QG T F +TVIIMTSN+GS I Sbjct: 615 GKTELCRTLAQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSVVLFDEVEKAHSDVFNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMI 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_BACSU (Negative regulator of genetic competence clpC/mecB OS=Bacillus subtilis GN=clpC PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.438e-38 Identity = 75/113 (66.37%), Postives = 96/113 (84.96%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL++ALA +F EE+++RIDMSEYMEKH+ RL+G+PPGYVGY+E GQLTE VRR+PY V+L DEI+KAH DVFN++L L+DGR+TDS+G T F NT++IMTSNVG+ Sbjct: 550 GKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGA 662
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.438e-38 Identity = 77/113 (68.14%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL+KALA ++F E A+VRIDMSEY EKH + RLIGAPPGYVGYE GQLTE VRRRPY V+L DEI+KAH DVF+V+L LD+GR+TD G T F NT++I+TSN+GS Sbjct: 612 GKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGS 724
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.438e-38 Identity = 77/113 (68.14%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL+KALA ++F E A+VRIDMSEY EKH + RLIGAPPGYVGYE GQLTE VRRRPY V+L DEI+KAH DVF+V+L LD+GR+TD G T F NT++I+TSN+GS Sbjct: 612 GKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGS 724 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |