CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_CAMJE (Chaperone protein clpB OS=Campylobacter jejuni GN=clpB PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.438e-38 Identity = 72/119 (60.50%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKT+ +KALA ++F E+A++R DMSE+MEKH++ RL+GAPPGY+G+EE G+LTE VRR+PY V+L DE++KAH DVFNV+L LDDGR TDS+G+T F NT+II+TSN+ S I+++ Sbjct: 613 GKTQSAKALAKFLFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEVEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASNAIMNL 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_ODOSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Odontella sinensis GN=clpC PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.878e-38 Identity = 73/116 (62.93%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+KAL+ YMF E++++R+DMSEYMEKH + +LIG+PPGYVGY E GQLTE V+ +PY V+L DE++KAH DVFN++L LDDGR+TDS+G T F NT+IIMT+N+G++ I Sbjct: 565 GKTELTKALSEYMFGNEDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVQTKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKGRTIDFRNTMIIMTTNLGAKII 680
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.878e-38 Identity = 75/113 (66.37%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL++ALA MF E+A++RIDMSEYME+HA RL+G+PPGYVGY+E GQLTE VRR+PY V+L DE++KAH +VFN++L L+DGR+TDS+G F NTVIIMTSNVG+ Sbjct: 553 GKTELARALAEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGA 665
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPN (Chaperone protein clpB OS=Mycoplasma pneumoniae GN=clpB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.453e-38 Identity = 75/118 (63.56%), Postives = 96/118 (81.36%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K+LA +F E+A++R DMSEYMEKH++ +LIGAPPGYVGYE+ G LTE VRR+PY V+L DEI+KAH DV N++L LDDG + DSQG +F NT+IIMTSN+GS YI++ Sbjct: 471 GKTELAKSLAEVLFDNEKAMIRFDMSEYMEKHSVAKLIGAPPGYVGYEQSGLLTEAVRRKPYCVLLFDEIEKAHPDVTNILLQVLDDGTLKDSQGRLVNFKNTMIIMTSNLGSNYIME 588
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BLOFL (Chaperone protein clpB OS=Blochmannia floridanus GN=clpB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.453e-38 Identity = 74/116 (63.79%), Postives = 94/116 (81.03%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL KAL+ ++F T+ A+VRIDMSE+MEKH++ +L+GAPPGY+GYE LTE +RRRPY ++L DEI+KAH DVFN++L LDDGR+TD+QG F NTVIIMTSN+GS I Sbjct: 612 GKTELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGAYLTESIRRRPYSIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMTSNLGSDLI 727
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.204e-38 Identity = 75/118 (63.56%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL++ALA MF ++A++R+DMSE+MEKHA+ RL+GAP GYVG+++ GQLTE VRR+PY VIL DEI+KAH DVFN++L LDDG +TD++G T F NT+IIMTSNVG+Q + D Sbjct: 550 GKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPLGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD 667
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_HELPJ (Chaperone protein clpB OS=Helicobacter pylori J99 GN=clpB PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.204e-38 Identity = 76/120 (63.33%), Postives = 98/120 (81.67%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMD 360 GKTE +KALA ++F +++ L+RIDMSEYMEKHAI RLIGA PGYVGYEE GQLTE VRR+PY V+L DE++KAH DVFN++L LD+G +TDS+G+ F NT++I+TSNV S +L+ D Sbjct: 610 GKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNVASGALLEED 729
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_MYCGE (Chaperone protein clpB OS=Mycoplasma genitalium GN=clpB PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.184e-38 Identity = 75/118 (63.56%), Postives = 96/118 (81.36%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K+LA +F E+AL+R DMSEYMEKH++ +LIGAPPGY+GYE+ G LTE VRR+PY V+L DEI+KAH DV NV+L LDDG + DSQG +F NT+IIMTSN+GS ++L+ Sbjct: 471 GKTELAKSLAEVLFDNEKALIRFDMSEYMEKHSVAKLIGAPPGYIGYEQSGLLTEAVRRKPYSVLLFDEIEKAHPDVTNVLLQVLDDGTLKDSQGRVVNFKNTLIIMTSNLGSNFLLE 588
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_COREF (Chaperone protein clpB OS=Corynebacterium efficiens GN=clpB PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.184e-38 Identity = 71/113 (62.83%), Postives = 94/113 (83.19%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL+KA++ ++F E A+VRIDMSEY EKH++ RL+GAPPGYVGY++ GQLTE VRRRPY +L DE++KAH DVF+++L LDDGR+TD QG T F NT++I+TSN+G+ Sbjct: 613 GKTELAKAVSEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTTVLFDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNTILILTSNLGA 725
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.465e-38 Identity = 72/116 (62.07%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+KALA Y F +E +++R+DMSEYME+H + +LIG+PPGYVGY E G LTE VR++PY VIL DEI+KAH D+FN++L L+DGR+TD++G T F NT++IMTSN+GS+ I Sbjct: 554 GKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMTSNIGSKVI 669 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |