CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPE_BACSU (ATP-dependent Clp protease ATP-binding subunit clpE OS=Bacillus subtilis GN=clpE PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.346e-36 Identity = 73/113 (64.60%), Postives = 94/113 (83.19%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTELSK LA +F T++A++R+DMSEYMEKHA+ ++IG+PPGYVG+EE GQLTE VRR PY ++L DEI+KAH DV ++ L ++DGR+TDSQG T SF +TVIIMTSN G+ Sbjct: 451 GKTELSKTLADELFGTKDAIIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNAGA 563
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIN (Chaperone protein clpB OS=Leptospira interrogans GN=clpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.758e-36 Identity = 73/116 (62.93%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTE +KALA ++F A+ RIDMSEYME H++ RLIGAPPGYVGY+E GQLTE VRRRPY +IL DEI+KA+ +VFN+ L LD+GR+TD +G F NTVII+TSN+GS+ + Sbjct: 615 GKTETAKALAEFLFDDVNAMTRIDMSEYMEAHSVARLIGAPPGYVGYDEGGQLTEAVRRRPYSLILFDEIEKANPEVFNIFLQILDEGRLTDGKGRNVDFKNTVIILTSNIGSEVL 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIC (Chaperone protein clpB OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=clpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.758e-36 Identity = 73/116 (62.93%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTE +KALA ++F A+ RIDMSEYME H++ RLIGAPPGYVGY+E GQLTE VRRRPY +IL DEI+KA+ +VFN+ L LD+GR+TD +G F NTVII+TSN+GS+ + Sbjct: 615 GKTETAKALAEFLFDDVNAMTRIDMSEYMEAHSVARLIGAPPGYVGYDEGGQLTEAVRRRPYSLILFDEIEKANPEVFNIFLQILDEGRLTDGKGRNVDFKNTVIILTSNIGSEIL 730
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPE_LACLM (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpE PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 1.488e-35 Identity = 72/113 (63.72%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL+K LA +F + E+++R DMSEYMEKH++ +LIGAPPGYVGYEE GQLTE VRR PY +IL DEI+KAH DV ++ L L+DGR+TD+QG T SF +++IIMTSN G+ Sbjct: 486 GKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGT 598
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPE_LACLA (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. lactis GN=clpE PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.488e-35 Identity = 72/113 (63.72%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGS 339 GKTEL+K LA +F + E+++R DMSEYMEKH++ +LIGAPPGYVGYEE GQLTE VRR PY +IL DEI+KAH DV ++ L L+DGR+TD+QG T SF +++IIMTSN G+ Sbjct: 486 GKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGT 598
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_PROMP (Chaperone protein clpB OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.488e-35 Identity = 70/119 (58.82%), Postives = 94/119 (78.99%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTELSK +A +F + ++ R+DMSEYMEKH++ ++IGAPPGY+G+E GQLTE VR+ PY +IL DEI+KAH DV +V+L LDDG +TD QG T SF N++I++TSN+GSQ I D+ Sbjct: 613 GKTELSKVIAKTIFDSNSSITRLDMSEYMEKHSVSKIIGAPPGYLGFESGGQLTEAVRKNPYSLILLDEIEKAHKDVLDVLLQVLDDGIITDGQGRTISFKNSIIVLTSNLGSQSINDL 731
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: HSP78_SCHPO (Heat shock protein 78, mitochondrial OS=Schizosaccharomyces pombe GN=hsp78 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 68/117 (58.12%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYIL 351 GKT L+KALA ++F T++A++R DMSE+ EKH I RLIG+PPGY+GYEE G+LTE VRR+PY V+L DE++KAH D+ N++L LD+G +TDSQG F +T+I+MTSN+GS ++ Sbjct: 544 GKTALTKALAEFLFDTDKAMIRFDMSEFQEKHTIARLIGSPPGYIGYEESGELTEAVRRKPYAVLLFDELEKAHHDITNLLLQVLDEGFLTDSQGRKVDFRSTLIVMTSNLGSDILV 660
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: HS104_SCHPO (Heat shock protein 104 OS=Schizosaccharomyces pombe GN=hsp104 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 74/116 (63.79%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKT L+KALA +MF E A++RIDMSEYMEKH++ RLIGAPPGYVG+E GQLTE +RRRPY VIL DEI+KA +V V+L LDDGR+T QG N VIIMTSN+G++Y+ Sbjct: 626 GKTLLTKALASFMFDDENAMIRIDMSEYMEKHSVSRLIGAPPGYVGHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQGQVVDAKNAVIIMTSNLGAEYL 741
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_TROWT (Chaperone protein clpB OS=Tropheryma whipplei (strain Twist) GN=clpB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.315e-35 Identity = 73/122 (59.84%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKT+L KALA ++ E +VRIDMSEY EK +I RLIGAPPGY+G+E GQLTE VRRRPY V+L DE +KAH +VF+++L LD+GR+TDS G T F NT+I++TSN+GS+Y+ D+ E Sbjct: 460 GKTQLVKALASLLYDGE--IVRIDMSEYSEKFSISRLIGAPPGYIGHESAGQLTESVRRRPYSVVLFDEAEKAHPEVFDILLQVLDEGRLTDSHGRTVDFRNTIIVLTSNIGSRYLSDISLE 579
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_TROW8 (Chaperone protein clpB OS=Tropheryma whipplei (strain TW08/27) GN=clpB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.315e-35 Identity = 73/122 (59.84%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKT+L KALA ++ E +VRIDMSEY EK +I RLIGAPPGY+G+E GQLTE VRRRPY V+L DE +KAH +VF+++L LD+GR+TDS G T F NT+I++TSN+GS+Y+ D+ E Sbjct: 454 GKTQLVKALASLLYDGE--IVRIDMSEYSEKFSISRLIGAPPGYIGHESAGQLTESVRRRPYSVVLFDEAEKAHPEVFDILLQVLDEGRLTDSHGRTVDFRNTIIVLTSNIGSRYLSDISLE 573 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |