CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPC_STRP6 (Probable ATP-dependent Clp protease ATP-binding subunit OS=Streptococcus pyogenes serotype M6 GN=clpC PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 60/113 (53.10%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F +++A++R+DMSEY ++ A+ +LIG GYVGY++ LTE VRR PY ++L DEI+KA + ++L LDDGR+TD QG T +F NTVII TSN G Sbjct: 457 GKTELAKQLALDLFGSKDAIIRLDMSEYNDRTAVSKLIGTTAGYVGYDDNNNTLTERVRRNPYAIVLLDEIEKADPQIITLLLQVLDDGRLTDGQGNTINFKNTVIIATSNAG 569
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPA_ECOLI (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli (strain K12) GN=clpA PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.154e-26 Identity = 60/116 (51.72%), Postives = 80/116 (68.97%), Query Frame = 1 Query: 1 GKTE----LSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTE LSKAL L+R DMSEYME+H + RLIGAPPGYVG+++ G LT+ V + P+ V+L DEI+KAH DVFN++L +D+G +TD+ G F N V++MT+N G Sbjct: 500 GKTEVTVQLSKALGI-------ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPA_ECOL6 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O6 GN=clpA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.154e-26 Identity = 60/116 (51.72%), Postives = 80/116 (68.97%), Query Frame = 1 Query: 1 GKTE----LSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTE LSKAL L+R DMSEYME+H + RLIGAPPGYVG+++ G LT+ V + P+ V+L DEI+KAH DVFN++L +D+G +TD+ G F N V++MT+N G Sbjct: 500 GKTEVTVQLSKALGI-------ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPA_ECO57 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O157:H7 GN=clpA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.154e-26 Identity = 60/116 (51.72%), Postives = 80/116 (68.97%), Query Frame = 1 Query: 1 GKTE----LSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTE LSKAL L+R DMSEYME+H + RLIGAPPGYVG+++ G LT+ V + P+ V+L DEI+KAH DVFN++L +D+G +TD+ G F N V++MT+N G Sbjct: 500 GKTEVTVQLSKALGI-------ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_HUMAN (Caseinolytic peptidase B protein homolog OS=Homo sapiens GN=CLPB PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.813e-26 Identity = 57/117 (48.72%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 GKTELSKALAFYMFY-TEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+K A YM ++ +R+DMSE+ E+H + + IG+PPGYVG+EE GQLT+ +++ P V+L DE+DKAH DV ++L D+GR+TD +G T + + IMTSNV S I Sbjct: 386 GKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 502
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_RAT (Caseinolytic peptidase B protein homolog OS=Rattus norvegicus GN=Clpb PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.674e-26 Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 GKTELSKALAFYMFY-TEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+K A YM ++ +R+DMSE+ E+H + + IG+PPGY+G+EE GQLT+ +++ P V+L DE+DKAH DV ++L D+GR+TD +G T + + IMTSNV S I Sbjct: 356 GKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 472
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_MOUSE (Caseinolytic peptidase B protein homolog OS=Mus musculus GN=Clpb PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.674e-26 Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 GKTELSKALAFYMFY-TEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+K A YM ++ +R+DMSE+ E+H + + IG+PPGY+G+EE GQLT+ +++ P V+L DE+DKAH DV ++L D+GR+TD +G T + + IMTSNV S I Sbjct: 356 GKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 472
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_BOVIN (Caseinolytic peptidase B protein homolog OS=Bos taurus GN=CLPB PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.674e-26 Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 GKTELSKALAFYMFY-TEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYI 348 GKTEL+K A YM ++ +R+DMSE+ E+H + + IG+PPGY+G+EE GQLT+ +++ P V+L DE+DKAH DV ++L D+GR+TD +G T + + IMTSNV S I Sbjct: 356 GKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 472
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAAB (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F +EAL+R+DMSEY + AI ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAISKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAAR (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MRSA252) GN=clpL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.185e-26 Identity = 59/113 (52.21%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F +EAL+R+DMSEY + A+ ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |