CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAAW (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MW2) GN=clpL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.823e-25 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F ++AL+R+DMSEY + A+ ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAAS (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MSSA476) GN=clpL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.823e-25 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F ++AL+R+DMSEY + A+ ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAAN (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain N315) GN=clpL PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.823e-25 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F ++AL+R+DMSEY + A+ ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAAM (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpL PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.823e-25 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F ++AL+R+DMSEY + A+ ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAAC (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain COL) GN=clpL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.823e-25 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F ++AL+R+DMSEY + A+ ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAA8 (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain NCTC 8325) GN=clpL PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.823e-25 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F ++AL+R+DMSEY + A+ ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPL_STAA3 (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain USA300) GN=clpL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.823e-25 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQ-LTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVG 336 GKTEL+K LA +F ++AL+R+DMSEY + A+ ++IG GYVGY++ LTE VRR PY VIL DEI+KA+ + ++L +DDG +TD QG +F NT+II TSN G Sbjct: 462 GKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG 574
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPV1_PSEAE (Protein clpV1 OS=Pseudomonas aeruginosa GN=clpV1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.381e-25 Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTE + ALA M+ E+ ++ I+MSE+ E H + L GAPPGY+GY E G LTE VRR+PY V+L DE++KAH DV + D G + D +G F NT+I++T+N G++ I + Sbjct: 645 GKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTEMIASL 763
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: AMIB_PSEAE (ATP-dependent protease ATP-binding subunit-like protein amiB OS=Pseudomonas aeruginosa GN=amiB PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTE-----GVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQG-LTESFTNTVIIMTSNVGSQYILDMDD 363 GKTE+ +ALA + E R+DM+ ++H L GAPPGYVG +E L E G RP +V+ DE++KA +V + +L+ LD+G + + G T F NT++ MTSN+ + I D+ Sbjct: 101 GKTEIVRALARALHGDAEGFCRVDMNTLSQEHYAAALTGAPPGYVGAKEGTTLLEQDKLDGSPGRPGIVLF-DELEKASPEVVHALLNVLDNGLLRVASGERTYHFRNTLVFMTSNLCAHEIQRYDE 226
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: ADPR_RHOER (ATP-dependent protease ATP-binding subunit-like protein OS=Rhodococcus erythropolis PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.694e-11 Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTE--GVRRRPYL--VILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTE-SFTNTVIIMTSNVGSQYILD 354 GKTEL + +A + + L RIDM+ ++H GAPPGY G +E L + V PY ++L DE++KA V +L LD+G + + G + SF N+ + +TSN+GS + + Sbjct: 84 GKTELVRRVAAELRSGPDDLCRIDMNALAQEHYAASFSGAPPGYAGSKESFTLFDKNTVEGDPYTPGIVLFDEVEKADPTVLRALLQVLDNGELRLANGQQKISFRNSYVFLTSNLGSAAVAE 206 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |