CX300169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 4.320e-43 Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K LA +F TEEA++RIDM+EYMEKHA+ RLIGAPPGYVGYEE GQLTE VRRRPY VIL DEI+KAH DVFN++L LDDGR+TDS G T F NTVII+TSN+GS IL+ Sbjct: 600 GKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILE 717
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.320e-43 Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL+K LA +F TEEA++RIDM+EYMEKHA+ RLIGAPPGYVGYEE GQLTE VRRRPY VIL DEI+KAH DVFN++L LDDGR+TDS G T F NTVII+TSN+GS IL+ Sbjct: 600 GKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILE 717
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_COXBU (Chaperone protein clpB OS=Coxiella burnetii GN=clpB PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.320e-43 Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL KALA ++F TE+A+VRIDMSE+MEKH++ RLIGAPPGYVGYEE G LTE +RRRPY VIL DEI+KAH+DVFNV+L LDDGR+TD QG T F NTVI+MTSN+GS I + E Sbjct: 612 GKTELCKALAVFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGE 733
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_LISIN (Chaperone protein clpB OS=Listeria innocua GN=clpB PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.642e-43 Identity = 82/122 (67.21%), Postives = 101/122 (82.79%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL+KALA+ MF +E+ ++RIDMSEYMEKH++ RL+GAPPGYVGYEE GQLTE VRR PY ++L DEI+KAH DVFN++L LDDGR+TDSQG F NTVIIMTSN+GS +L+ +E Sbjct: 616 GKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEE 737
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB2_THEEB (Chaperone protein clpB 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB2 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 7.368e-43 Identity = 83/119 (69.75%), Postives = 101/119 (84.87%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL++ALA +F E ALVRIDMSEYMEKHA+ R+IGAPPGYVG++ GQLTE +RRRPY V+L DE++KAH +VFNV+L LDDGR+TDSQG T F NTVIIMTSN+GS++ILD+ Sbjct: 624 GKTELARALAEALFDDENALVRIDMSEYMEKHAVSRMIGAPPGYVGFDSGGQLTEAIRRRPYAVVLFDEVEKAHPEVFNVLLQVLDDGRITDSQGRTVDFRNTVIIMTSNLGSEHILDL 742
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 9.623e-43 Identity = 86/122 (70.49%), Postives = 101/122 (82.79%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDDE 366 GKTEL KALA MF E A+VRIDMSE+ME+H++ RLIGAPPGYVGYEE G+LTE VRRRPY VIL DE++KAH DVFNV+L LDDGR+TD QG T +FTNTV++MTSNVGSQ I + +E Sbjct: 633 GKTELCKALAEVMFDDESAMVRIDMSEFMERHSVSRLIGAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNVGSQVIQRVTEE 754
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 9.623e-43 Identity = 84/119 (70.59%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL KALA ++F +E+ L+RIDMSEYMEKHA+ RLIGAPPGYVGYEE G LTE VRR+PY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTVI+MTSN+GSQ+I M Sbjct: 614 GKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQM 732
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMA (Chaperone protein clpB OS=Neisseria meningitidis serogroup A GN=clpB PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 9.623e-43 Identity = 84/119 (70.59%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDM 357 GKTEL KALA ++F +E+ L+RIDMSEYMEKHA+ RLIGAPPGYVGYEE G LTE VRR+PY VIL DE++KAH DVFN++L LDDGR+TD QG T F NTVI+MTSN+GSQ+I M Sbjct: 614 GKTELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQM 732
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_AGRT5 (Chaperone protein clpB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpB PE=3 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 9.623e-43 Identity = 83/121 (68.60%), Postives = 100/121 (82.64%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILDMDD 363 GKTEL+K+LA ++F E A+VR+DMSEYMEKH++ RLIGAPPGYVGYEE G LTE VRRRPY V+L DEI+KAH DVFNV+L LDDGR+TD QG T F NT+IIMTSN+GS+++ M D Sbjct: 612 GKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQMGD 732
BLAST of CX300169 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.257e-42 Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 1 GKTELSKALAFYMFYTEEALVRIDMSEYMEKHAILRLIGAPPGYVGYEE*GQLTEGVRRRPYLVILDDEIDKAHSDVFNVVLHNLDDGRVTDSQGLTESFTNTVIIMTSNVGSQYILD 354 GKTEL K LA +F TEE +VR+DMSEYMEKHA+ RLIGAPPGYVGY+E GQLTE VRR+PY V+L DE++KAH DVFN +L LDDGR+TDS G T F NT+IIMTSN+GS Y+LD Sbjct: 615 GKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVARLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIIIMTSNIGSPYMLD 732 The following BLAST results are available for this feature:
BLAST of CX300169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300169 ID=CX300169; Name=CX300169; organism=Citrus clementina; type=EST; length=367bpback to top |